GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
Source | Last Updated |
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GlycoNAVI Proteins | November 07, 2024 |
PDB ID | UniProt ID | Title ▼ | Descriptor |
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8AQW | P10104 | BA.4/5 SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
8AQW | P0DTC2 | BA.4/5 SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
8AQS | P10104 | BA.4/5 SARS-CoV-2 Spike bound to human ACE2 (local) | |
8AQS | P0DTC2 | BA.4/5 SARS-CoV-2 Spike bound to human ACE2 (local) | |
8AQS | Q9BYF1 | BA.4/5 SARS-CoV-2 Spike bound to human ACE2 (local) | |
8XUU | P0DTC2 | BA.2.86-T356K Spike Trimer in complex with heparan sulfate (Local refinement) | |
8X4Z | P0DTC2 | BA.2.86 Spike Trimer with ins483V mutation (3 RBD down) | |
8X50 | P0DTC2 | BA.2.86 Spike Trimer with ins483V mutation (1 RBD up) | |
8X55 | P0DTC2 | BA.2.86 Spike Trimer with T356K mutation (3 RBD down) | |
8X56 | P0DTC2 | BA.2.86 Spike Trimer with T356K mutation (1 RBD up) | |
8XUR | P0DTC2 | BA.2.86 Spike Trimer in complex with heparan sulfate | |
8WHZ | Q9BYF1 | BA.2.86 RBD in complex with hACE2 (local refinement) | |
8WHZ | P0DTC2 | BA.2.86 RBD in complex with hACE2 (local refinement) | |
8AQV | P01865 | BA.2.12.1 SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
8AQV | Q8R0I0 | BA.2.12.1 SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
8AQV | P10104 | BA.2.12.1 SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
8AQV | P0DTC2 | BA.2.12.1 SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
8CIM | P10104 | BA.2-07 FAB IN COMPLEX WITH SARS-COV-2 BA.2.12.1 SPIKE GLYCOPROTEIN | |
8CIM | P0DTC2 | BA.2-07 FAB IN COMPLEX WITH SARS-COV-2 BA.2.12.1 SPIKE GLYCOPROTEIN | |
8CIM | 8CIM | BA.2-07 FAB IN COMPLEX WITH SARS-COV-2 BA.2.12.1 SPIKE GLYCOPROTEIN | |
8WGV | P0DTC2 | BA.2(S375) Spike (S6P)/hACE2 complex | |
8WGV | Q9BYF1 | BA.2(S375) Spike (S6P)/hACE2 complex | |
8AQU | P01865 | BA.1 SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
8AQU | Q8R0I0 | BA.1 SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
8AQU | P10104 | BA.1 SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
8AQU | P0DTC2 | BA.1 SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
8OWW | P0DTC2 | B5-5 nanobody bound to SARS-CoV-2 spike RBD (Wuhan) | |
8OWW | 8OWW | B5-5 nanobody bound to SARS-CoV-2 spike RBD (Wuhan) | |
6OKP | B3UEZ6 | B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074 | Envelope glycoprotein gp41, Envelope glycoprotein gp120, 10-1074 Heavy Chain,10-1074 Light Chain, SF12 Heavy Chain,SF12 Light Chain |
6OKP | B3UES2 | B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074 | Envelope glycoprotein gp41, Envelope glycoprotein gp120, 10-1074 Heavy Chain,10-1074 Light Chain, SF12 Heavy Chain,SF12 Light Chain |
6OKP | S6B291 | B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074 | Envelope glycoprotein gp41, Envelope glycoprotein gp120, 10-1074 Heavy Chain,10-1074 Light Chain, SF12 Heavy Chain,SF12 Light Chain |
6OKP | 6OKP | B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074 | Envelope glycoprotein gp41, Envelope glycoprotein gp120, 10-1074 Heavy Chain,10-1074 Light Chain, SF12 Heavy Chain,SF12 Light Chain |
6OKP | S6B291 | B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074 | Envelope glycoprotein gp41, Envelope glycoprotein gp120, 10-1074 Heavy Chain,10-1074 Light Chain, SF12 Heavy Chain,SF12 Light Chain |
6OKP | 6OKP | B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074 | Envelope glycoprotein gp41, Envelope glycoprotein gp120, 10-1074 Heavy Chain,10-1074 Light Chain, SF12 Heavy Chain,SF12 Light Chain |
6OKP | Q8N5F4 | B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074 | Envelope glycoprotein gp41, Envelope glycoprotein gp120, 10-1074 Heavy Chain,10-1074 Light Chain, SF12 Heavy Chain,SF12 Light Chain |
6OKP | Q8N5F4 | B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074 | Envelope glycoprotein gp41, Envelope glycoprotein gp120, 10-1074 Heavy Chain,10-1074 Light Chain, SF12 Heavy Chain,SF12 Light Chain |
6OKP | P01834 | B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074 | Envelope glycoprotein gp41, Envelope glycoprotein gp120, 10-1074 Heavy Chain,10-1074 Light Chain, SF12 Heavy Chain,SF12 Light Chain |
6OKP | P01834 | B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074 | Envelope glycoprotein gp41, Envelope glycoprotein gp120, 10-1074 Heavy Chain,10-1074 Light Chain, SF12 Heavy Chain,SF12 Light Chain |
6EDU | B3UEZ6 | B41 SOSIP.664 in complex with soluble CD4 (D1-D2), the co-receptor mimicking antibody 21c and the broadly neutralizing antibody 8ANC195 | Envelope glycoprotein gp160, PG9 Fab heavy chain,PG9 Fab heavy chain, PG9 Fab light chain,PG9 Fab light chain, 8ANC195 Fab heavy chain,8ANC195 Fab heavy chain, 8ANC195 Fab light chain,8ANC195 Fab light chain |
6EDU | B3UES2 | B41 SOSIP.664 in complex with soluble CD4 (D1-D2), the co-receptor mimicking antibody 21c and the broadly neutralizing antibody 8ANC195 | Envelope glycoprotein gp160, PG9 Fab heavy chain,PG9 Fab heavy chain, PG9 Fab light chain,PG9 Fab light chain, 8ANC195 Fab heavy chain,8ANC195 Fab heavy chain, 8ANC195 Fab light chain,8ANC195 Fab light chain |
6EDU | P01730 | B41 SOSIP.664 in complex with soluble CD4 (D1-D2), the co-receptor mimicking antibody 21c and the broadly neutralizing antibody 8ANC195 | Envelope glycoprotein gp160, PG9 Fab heavy chain,PG9 Fab heavy chain, PG9 Fab light chain,PG9 Fab light chain, 8ANC195 Fab heavy chain,8ANC195 Fab heavy chain, 8ANC195 Fab light chain,8ANC195 Fab light chain |
6EDU | 6EDU | B41 SOSIP.664 in complex with soluble CD4 (D1-D2), the co-receptor mimicking antibody 21c and the broadly neutralizing antibody 8ANC195 | Envelope glycoprotein gp160, PG9 Fab heavy chain,PG9 Fab heavy chain, PG9 Fab light chain,PG9 Fab light chain, 8ANC195 Fab heavy chain,8ANC195 Fab heavy chain, 8ANC195 Fab light chain,8ANC195 Fab light chain |
3CKB | Q8A1G2 | B. thetaiotaomicron SusD with maltotriose | |
3CK9 | Q8A1G2 | B. thetaiotaomicron SusD with maltoheptaose | |
3CK8 | Q8A1G2 | B. thetaiotaomicron SusD with beta-cyclodextrin | |
3CK7 | Q8A1G2 | B. thetaiotaomicron SusD with alpha-cyclodextrin | |
7R55 | F2UID9 | B-trefoil lectin from Salpingoeca rosetta in complex with Gb3 | |
7QE4 | F2UID9 | B-trefoil lectin from Salpingoeca rosetta in complex with GalNAc | |
2PYH | Q44493 | Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module complexed with mannuronan trisaccharide | |
5ZCQ | P00396 | Azide-bound cytochrome c oxidase structure determined using the crystals exposed to 10 mM azide solution for 2 days |
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: August 19, 2024