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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Collagen alpha-1(VI) chain
Summary
- UniProt ID
- P12109
- Gene Symbol
-
- COL6A1
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- Cell adhesion
- Collagen
- Congenital muscular dystrophy
- Direct protein sequencing
- Disease variant
- Extracellular matrix
- Glycoprotein
- Hydroxylation
- Reference proteome
- Repeat
- Signal
- Gene Ontology (GO)
| GO Term |
|---|
| collagen type VI trimer |
| mitochondrion |
| endoplasmic reticulum lumen |
| sarcoplasmic reticulum |
| GO Term |
|---|
| collagen binding |
| extracellular matrix structural constituent conferring tensile strength |
| platelet-derived growth factor binding |
Sequence
MRAARALLPLLLQACWTAAQDEPETPRAVAFQDCPVDLFFVLDTSESVALRLKPYGALVDKVKSFTKRFIDNLRDRYYRCDRNLVWNAGALHYSDEVEIIQGLTRMPGGRDALKSSVDAVKYFGKGTYTDCAIKKGLEQLLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAKHLGVKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEEAISQTIDTIVDMIKNNVEQVCCSFECQPARGPPGLRGDPGFEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGVKGEMGYPGLPGCKGSPGFDGIQGPPGPKGDPGAFGLKGEKGEPGADGEAGRPGSSGPSGDEGQPGEPGPPGEKGEAGDEGNPGPDGAPGERGGPGERGPRGTPGTRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEGPPGSEGARGAPGPAGPPGDPGLMGERGEDGPAGNGTEGFPGFPGYPGNRGAPGINGTKGYPGLKGDEGEAGDPGDDNNDIAPRGVKGAKGYRGPEGPQGPPGHQGPPGPDECEILDIIMKMCSCCECKCGPIDLLFVLDSSESIGLQNFEIAKDFVVKVIDRLSRDELVKFEPGQSYAGVVQYSHSQMQEHVSLRSPSIRNVQELKEAIKSLQWMAGGTFTGEALQYTRDQLLPPSPNNRIALVITDGRSDTQRDTTPLNVLCSPGIQVVSVGIKDVFDFIPGSDQLNVISCQGLAPSQGRPGLSLVKENYAELLEDAFLKNVTAQICIDKKCPDYTCPITFSSPADITILLDGSASVGSHNFDTTKRFAKRLAERFLTAGRTDPAHDVRVAVVQYSGTGQQRPERASLQFLQNYTALASAVDAMDFINDATDVNDALGYVTRFYREASSGAAKKRLLLFSDGNSQGATPAAIEKAVQEAQRAGIEIFVVVVGRQVNEPHIRVLVTGKTAEYDVAYGESHLFRVPSYQALLRGVFHQTVSRKVALG
Glycosylation Sites
| Position | Description | PubMed ID | GlyTouCan ID | Source |
|---|---|---|---|---|
| 212 | N-linked (GlcNAc...) asparagine | |||
| 516 | N-linked (GlcNAc...) asparagine | |||
| 537 | N-linked (GlcNAc...) asparagine | |||
| 701 |
|
|||
| 703 |
|
|||
| 804 | N-linked (GlcNAc...) asparagine |
|
||
| 896 | N-linked (GlcNAc...) asparagine |
|
||
|
|
G45395BF
G07246CJ
G43223CG
G27915IV
G70441OD
G87661QW
G27058EU
G84452RH
G70223PD
G60033FS
G41071NU
G59626AS
G46503DX
G70101JE
G80920RR
G42124LM
G23863VK
G90659AW
G62765YT
G64527OM
G95177YH
G05049YU
G31852PQ
G23719VF
G11314AS
G39188ZX
G41247ZX
G02815KT
G36442WJ
G29184RN
G96091TT
G47702MW
G63041LO
G45504EY
G47950XN
G83460ZZ
G10256JP
G43417UB
G47012YE
G82830MN
G83229XP
G75983OB
G00912UN
G48414YA
G11911BT
G46691LC
G80223IX
G25451PN
G51640FO
G46902YN
G72747WU
G06356OH
G92406TI
G41840AI
G01650EU
G23294PN
G65184UU
G59924QI
G84820NF
G29299MO
G37399XV
G82463GQ
G11870QZ
G47644PP
G72790NZ
G10486CT
G50045TK
G28541PG
G72735IY
G18647XP
G82119TF
G72291OX
G95865ZB
G05724UK
G33609NS
G39446WN
G23453IV
G57776ZU
G06110VR
G57317CE
G92050GC
G49108TO
Feature
: Glycosylation Site from GlyGen
: Glycosylation Site from UniProt
Pathway
| Pathway Name | Organism |
|---|---|
| Assembly of collagen fibrils and other multimeric structures | Homo sapiens |
| Collagen biosynthesis and modifying enzymes | Homo sapiens |
| Collagen chain trimerization | Homo sapiens |
| NCAM1 interactions | Homo sapiens |
| Signaling by PDGF | Homo sapiens |
Human Protein Atlas
Tissue with high expression from Human Protein Atlas. Tissues that are highly expressed are highlighted.
