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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Syndecan
Summary
- UniProt ID
- P49415
- Gene Symbol
-
- Sdc
- Syd
- Organism
- Drosophila melanogaster (fruit fly)
External Links
- PubChem
- P49415
Annotation
- Keyword
-
- Alternative splicing
- Developmental protein
- Differentiation
- Heparan sulfate
- Myogenesis
- Neurogenesis
- Reference proteome
- Signal
- Transmembrane helix
- Gene Ontology (GO)
| GO Term |
|---|
| cell surface |
| perivitelline space |
| membrane |
| axon |
| neuromuscular junction |
| synapse |
Sequence
MKPKQKISVEPLLLVAILIGVLVAATHAQDQKSVKPSAAAPSAAASRPHDEIYIDDDSIEGSGGRGGIHEDLEKDPDYSGSGFGPDDEDAEPDQHSHSSHNTRISQSSNSGINTAHTPTQTSSTIPTTSTSTPMPTTTPTATTPASTTTAAATQISSFANSSSTTTTTLAPTIPAEPQQPLFPPFDKDLDTESSGDGIDADAEDDDEDDGDDKDYDYNKELDKEIDIDGPEPGHLPPVVHHNTVETGHIPTTDEIDVDGGDEDDNGDSDIDGPRIGGNDGDITERGPGAGGSNVHELDPNTNVNSQPSDTKGIDHRPNGNEVVIMSEDDRTSSFFSQPGILAAVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALDEPKRSPANNSYAKNANNREFYA
Glycosylation Sites
| Position | Description | PubMed ID | GlyTouCan ID | Source |
|---|---|---|---|---|
| 62 | O-linked (Xyl...) (glycosaminoglycan) serine |
|
||
| 79 | O-linked (Xyl...) (glycosaminoglycan) serine |
|
||
| 81 | O-linked (Xyl...) (glycosaminoglycan) serine |
|
||
| 110 | O-linked (Xyl...) (glycosaminoglycan) serine |
|
||
| 160 | N-linked (GlcNAc...) asparagine |
|
||
| 194 | O-linked (Xyl...) (glycosaminoglycan) serine |
|
Feature
: Glycosylation Site from GlyGen
: Glycosylation Site from UniProt
Pathway
| Pathway Name | Organism |
|---|---|
| A tetrasaccharide linker sequence is required for GAG synthesis | Drosophila melanogaster |
| EPHB-mediated forward signaling | Drosophila melanogaster |
| HS-GAG biosynthesis | Drosophila melanogaster |
| HS-GAG degradation | Drosophila melanogaster |
| Post-translational protein phosphorylation | Drosophila melanogaster |
| Regulation of IGF Activity by IGFBP | Drosophila melanogaster |
| Syndecan interactions | Drosophila melanogaster |
