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Repository for lectin-assisted multimodality data
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MIRAGE
Probable syndecan
Summary
- UniProt ID
- P50605
- Gene Symbol
-
- F57C7.3
- sdn-1
- Gene ID
- 181259
- Organism
- Caenorhabditis elegans
Annotation
- Keyword
-
- Cell junction
- Cytoplasm
- Heparan sulfate
- Reference proteome
- Signal
- Transmembrane helix
- Gene Ontology (GO)
| GO Term |
|---|
| membrane |
| anchoring junction |
| cell surface |
| cytoplasm |
| GO Term |
|---|
| embryo development ending in birth or egg hatching |
| cell migration |
| nematode larval development |
| epidermis morphogenesis |
Sequence
MILKLNFCLSTYSVLILLSLSTQAFAANQAKTKVVPSSTISTKSLKNGISEQVEGSANIPGRLADIEVNGSGYPTDDEDGDDVHGSGKPPSSATTKSDKVTSPSHAVVTAKPTTVPTTTASFKPPVQPKPKPAANDKEIKVEEDEDDDEDEDEDDEDDEEDFADENIHNDEDFFTTTTTTTYRPIVVATTSTPRSAATNPPRQQPPMVTSTISSGPFSPFHETLANGFYAAIAGGVLVAVITAILLVLFVVFRIRKKDEGSYALDEPKQARPYASYGYTKASTKEFYA
Glycosylation Sites
| Position | Description | PubMed ID | GlyTouCan ID | Source |
|---|---|---|---|---|
| 69 | N-linked (GlcNAc...) asparagine |
|
||
| 71 | O-linked (Xyl...) (glycosaminoglycan) serine |
|
||
| 86 | O-linked (Xyl...) (glycosaminoglycan) serine |
|
||
| 214 | O-linked (Xyl...) (glycosaminoglycan) serine |
|
Feature
: Glycosylation Site from GlyGen
: Glycosylation Site from UniProt
Pathway
| Pathway Name | Organism |
|---|---|
| A tetrasaccharide linker sequence is required for GAG synthesis | Caenorhabditis elegans |
| EPHB-mediated forward signaling | Caenorhabditis elegans |
| HS-GAG biosynthesis | Caenorhabditis elegans |
| HS-GAG degradation | Caenorhabditis elegans |
| Post-translational protein phosphorylation | Caenorhabditis elegans |
| Regulation of IGF Activity by IGFBP | Caenorhabditis elegans |
| Syndecan interactions | Caenorhabditis elegans |
