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Glycan Structure Repository
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Glycomics MS raw data Repository
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Repository for lectin-assisted multimodality data
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MIRAGE
Lumican
Summary
- UniProt ID
- P51885
- Gene Symbol
-
- Lcn
- Ldc
- Lum
- Gene ID
- 17022
- Organism
- Mus musculus (house mouse)
External Links
- GlycoProtDB
- GPDB0003678
- GlyGen
- P51885
- PubChem
- P51885
- Re-Glyco
- P51885
Annotation
- Keyword
-
- Direct protein sequencing
- Disulfide bond
- Extracellular matrix
- Leucine-rich repeat
- Phosphoprotein
- Proteoglycan
- Pyrrolidone carboxylic acid
- Reference proteome
- Repeat
- Signal
- Sulfation
- Gene Ontology (GO)
| GO Term |
|---|
| extracellular region |
| fibrillar collagen trimer |
| extracellular matrix |
| collagen-containing extracellular matrix |
| GO Term |
|---|
| positive regulation of transforming growth factor beta1 production |
| positive regulation of transcription by RNA polymerase II |
| GO Term |
|---|
| collagen binding |
Sequence
MNVCAFSLALALVGSVSGQYYDYDIPLFMYGQISPNCAPECNCPHSYPTAMYCDDLKLKSVPMVPPGIKYLYLRNNQIDHIDEKAFENVTDLQWLILDHNLLENSKIKGKVFSKLKQLKKLHINYNNLTESVGPLPKSLQDLQLTNNKISKLGSFDGLVNLTFIYLQHNQLKEDAVSASLKGLKSLEYLDLSFNQMSKLPAGLPTSLLTLYLDNNKISNIPDEYFKRFTGLQYLRLSHNELADSGVPGNSFNISSLLELDLSYNKLKSIPTVNENLENYYLEVNELEKFDVKSFCKILGPLSYSKIKHLRLDGNPLTQSSLPPDMYECLRVANEITVN
Glycosylation Sites
| Position | Description | PubMed ID | GlyTouCan ID | Source |
|---|---|---|---|---|
| 88 | N-linked (GlcNAc...) (keratan sulfate) asparagine |
|
||
| 127 | N-linked (GlcNAc...) (keratan sulfate) asparagine | |||
| 160 | N-linked (GlcNAc...) (keratan sulfate) asparagine |
|
||
| 252 | N-linked (GlcNAc...) (keratan sulfate) asparagine |
|
G46674NU
Feature
: Glycosylation Site from GlyGen
: Glycosylation Site from UniProt
Pathway
| Pathway Name | Organism |
|---|---|
| Integrin cell surface interactions | Mus musculus |
| Keratan sulfate biosynthesis | Mus musculus |
| Keratan sulfate degradation | Mus musculus |
Disease
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:14720 | Ehlers-Danlos syndrome classic type 1 |
