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Glycan Structure Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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MIRAGE
Collectin-12
Summary
- UniProt ID
- Q8K4Q8
- Gene Symbol
-
- Clp1
- Colec12
- Srcl
- Gene ID
- 140792
- Organism
- Mus musculus (house mouse)
External Links
- GlycoProtDB
- GPDB0006803
- GlyConnect
- GlyGen
- Q8K4Q8
- RaftProt
- Q8K4Q8
- Re-Glyco
- Q8K4Q8
Annotation
- Keyword
-
- 3D-structure
- Calcium
- Coiled coil
- Collagen
- Disulfide bond
- Glycoprotein
- Lectin
- Metal-binding
- Receptor
- Reference proteome
- Repeat
- Signal-anchor
- Transmembrane helix
- Gene Ontology (GO)
| GO Term |
|---|
| collagen trimer |
| membrane |
| collagen-containing extracellular matrix |
| GO Term |
|---|
| carbohydrate binding |
| pattern recognition receptor activity |
| metal ion binding |
| scavenger receptor activity |
| low-density lipoprotein particle binding |
Sequence
MKDDFAEEEEVQSFGYKRFGIQEGTQCTKCKNNWALKFSIVLLYILCALLTITVAILGYKVVEKMDNVTDGMETSHQTYDNKLTAVESDLKKLGDQAGKKALSTNSELSTFRSDILDLRQQLQEITEKTSKNKDTLEKLQANGDSLVDRQSQLKETLQNNSFLITTVNKTLQAYNGYVTNLQQDTSVLQGNLQSQMYSQSVVIMNLNNLNLTQVQQRNLISNLQQSVDDTSLAIQRIKNDFQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNSQLSSFTGQMDNITTISQANEQSLKDLQDLHKDTENRTAVKFSQLEERFQVFETDIVNIISNISYTAHHLRTLTSNLNDVRTTCTDTLTRHTDDLTSLNNTLVNIRLDSISLRMQQDMMRSKLDTEVANLSVVMEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGSQGPPGPTGNKGQKGEKGEPGPPGPAGERGTIGPVGPPGERGSKGSKGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKDGLPGPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGPSGAMEPLALQNEPTPASEVNGCPPHWKNFTDKCYYFSLEKEIFEDAKLFCEDKSSHLVFINSREEQQWIKKHTVGRESHWIGLTDSEQESEWKWLDGSPVDYKNWKAGQPDNWGSGHGPGEDCAGLIYAGQWNDFQCDEINNFICEKEREAVPSSIL
Glycosylation Sites
| Position | Description | PubMed ID | GlyTouCan ID | Source |
|---|---|---|---|---|
| 67 | N-linked (GlcNAc...) asparagine | |||
| 159 | N-linked (GlcNAc...) asparagine |
|
||
| 168 | N-linked (GlcNAc...) asparagine | |||
| 271 | N-linked (GlcNAc...) asparagine | |||
| 280 |
|
|
||
| 299 |
|
|
||
| 323 |
|
|||
| 349 |
|
|
||
| 386 |
|
|||
| 416 |
|
G80920RR
G12270AG
G10486CT
G62765YT
G27915IV
G74724QE
Feature
: Glycosylation Site from GlyGen
: Glycosylation Site from UniProt
