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Standards Ontologies Notations
Collagen alpha-1(I) chain

Summary
UniProt ID
Q9YIB4
Gene Symbol
  • COL1A1
Organism
Cynops pyrrhogaster (Japanese firebelly newt)
External Links
Annotation
Keyword
  • Calcium
  • Collagen
  • Disulfide bond
  • Extracellular matrix
  • Glycoprotein
  • Hydroxylation
  • Metal-binding
  • Pyrrolidone carboxylic acid
  • Repeat
  • Signal
Gene Ontology (GO)
Displaying 1 entry
GO Term
extracellular matrix organization
Displaying all 2 entries
GO Term
collagen type IV trimer
extracellular space
Annotation information from UniProt.
Sequence
MFSFVDNRLLVLLAACVLLVRALDQEDIESGLCHQEGTTYSDKDVWKPEPCVICVCDNGNIMCDDVTCGDYPVDCPNAEIPFGECCPVCPDGDGTSYSEQTGVEGPKGEVGPKGDRGLPGPPGRDGNPGLPGPPGPPGPPGLGGNFAPQMSYGYDEKSAGISVPGPMGPMGPRGPPGPSGSPGPQGFQGPSGEPGEPGAAGALGPRGLPGPPGKNGDDGESGKPGRPGERGPSGPQGARGLPGTAGLPGMKGHRGFNGLDGAKGDNGPAGPKGEPGNPGENGAPGQAGPRGLPGERGRPGAPGPAGARGNDGSPGAAGPPGPTGPTGPPGFPGAVGAKGDAGPQGSRGSEGPQGARGEPGAPGPAGAAGPSGNPGTDGQPGGKGATGSPGIAGAPGFPGARGAPGPQGPAGAPGPKGNNGEPGAQGNKGEPGAKGEPGPAGVQGPPGPSGEEGKRGSRGEPGPAGPPGPAGERGGPGSRGFPGSDGASGPKGAPGERGSVGPAGPKGSTGESGRPGEPGLPGAKGLTGSPGSPGPDGKTGPAGAAGQDGHPGPPGPSGARGQSGVMGFPGPKGAAGEPGKSGERGVAGPPGATGAPGKDGEAGAQGPPGPSGPSGERGEQGPAGSPGFQGLPGSPGPAGEAGKPGEQGAPGDAGGPGPSGPRGERGFPGERGGQGPAGAQGPRGSPGSPGNDGAKGEAGAAGAPGGRGPPGLQGMPGERGSAGMPGAKGDRGDAGTKGADGAPGKDGARGLTGPIGPPGPSGAPGDKGEGGPSGPAGPTGARGSPGERGEPGAPGPAGICGPPGADGQPGAKGESGDAGPKGDAGAPGPAGPTGAPGPAGNVGAPGPKGTRGAAGPPGATGFPGAAGRLGPPGPSGNAGPPGPPGPGGKEGAKGSRGETGPAGRSGEPGPAGPPGPSGEKGSPGSDGPAGAPGIPGPQGIAGQRGVVGLPGQRGERGFSGLPGPAGEPGKQGPSGPNGERGPPGPSGPPGLGGPPGEPGREGSPGSEGAPGRDGSPGPKGDRGENGPSGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPAGPSGVRGAPGPAGARGDKGEAGEQGERGMKGHRGFNGMQGPPGPPGSSGEQGAPGPSGPAGPRGPPGSSGSTGKDGVNGLPGPIGPPGPRGRNGDVGPAGPPGPPGPPGPPGPPSGGFDFSFMPQPPEPKSHGDGRYFRADDANVVRDRDLEVDTTLKSLSAQIENIRSPEGTRKNPARTCRDLKMCHSDWKSGDYWIDPNQGCNLDAIKVHCNMETGETCVYPSQASISQKNWYTSKNPREKKHVWFGETMSDGFQFEYGGEGSDPADVNIQLTFLRLMATEASQNITYHCKNSVAYMDQETGNLKKAVLLQGSNEIEIRAEGNSRFTYGVTEDGCTQHTGEWGKTVIEYKTTKTSRLPIIDIAPMDVGTPDQEFGIDIGPVCFL
  • N : N-glycosylation Site
  • ___ : Potential Sequon
Glycosylation Sites
Displaying all 3 entries
Position Description PubMed ID GlyTouCan ID Source
251 O-linked (Gal...) hydroxylysine; alternate
1094 O-linked (Gal...) hydroxylysine; alternate
1351 N-linked (GlcNAc...) asparagine
Feature
  • ProtVista GlyGen : Glycosylation Site from GlyGen
  • ProtVista UniProt : Glycosylation Site from UniProt
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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

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Last updated: August 19, 2024