GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name	UniProt ID	Gene Symbol	Gene Symbol Aliases	Gene Symbol All	Species	Taxonomy ID	No. of Glycosylation Sites	No. of GlyTouCan IDs ▲	GO Labels	GO IDs
Zinc finger protein 276	Q8N554	ZNF276	CENP-Z ZFP276 ZNF477	ZNF276 CENP-Z ZFP276 ZNF477	Homo sapiens	9606		1	chromatin insulator sequence binding chromosome kinetochore nucleus regulation of transcription by RNA polymerase II sequence-specific double-stranded DNA binding zinc ion binding	GO:0000776 GO:0005634 GO:0005694 GO:0006357 GO:0008270 GO:0043035 GO:1990837
Vitamin D3 receptor	P48281	Vdr	Nr1i1	Vdr Nr1i1	Mus musculus	10090		1	DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding RNA polymerase II transcription regulator complex T-tubule animal organ morphogenesis apoptotic process involved in mammary gland involution apoptotic signaling pathway bile acid signaling pathway calcitriol binding calcium ion transport cell differentiation cell morphogenesis cytosol decidualization dense fibrillar component euchromatin heterochromatin intestinal absorption intracellular calcium ion homeostasis lactation lithocholic acid binding lithocholic acid receptor activity mRNA transcription by RNA polymerase II mammary gland branching involved in pregnancy negative regulation of DNA-templated transcription negative regulation of bone trabecula formation negative regulation of cell population proliferation negative regulation of keratinocyte proliferation negative regulation of ossification negative regulation of transcription by RNA polymerase II nuclear matrix nuclear receptor activity nuclear retinoid X receptor binding nucleic acid binding nucleoplasm nucleus perinuclear region of cytoplasm phosphate ion transmembrane transport positive regulation of apoptotic process involved in mammary gland involution positive regulation of bone mineralization positive regulation of gene expression positive regulation of keratinocyte differentiation positive regulation of parathyroid hormone secretion positive regulation of transcription by RNA polymerase II positive regulation of vitamin D receptor signaling pathway receptor complex regulation of DNA-templated transcription regulation of calcidiol 1-monooxygenase activity regulation of calcium ion transport response to bile acid sequence-specific DNA binding skeletal system development small molecule binding vitamin D binding vitamin D receptor signaling pathway vitamin D response element binding zinc ion binding	GO:0000122 GO:0000791 GO:0000792 GO:0000902 GO:0000978 GO:0001501 GO:0001651 GO:0003676 GO:0003677 GO:0004879 GO:0005499 GO:0005634 GO:0005654 GO:0005829 GO:0006355 GO:0006816 GO:0006874 GO:0007595 GO:0008270 GO:0008285 GO:0009887 GO:0010628 GO:0010839 GO:0016363 GO:0030154 GO:0030279 GO:0030315 GO:0030501 GO:0035435 GO:0036094 GO:0038183 GO:0038186 GO:0042789 GO:0043235 GO:0043565 GO:0045618 GO:0045892 GO:0045944 GO:0046697 GO:0046965 GO:0048471 GO:0050892 GO:0051924 GO:0060057 GO:0060058 GO:0060558 GO:0060745 GO:0070561 GO:0070564 GO:0070644 GO:0090575 GO:0097190 GO:1900155 GO:1902098 GO:1902121 GO:1903412 GO:2000830
Growth arrest specific 7	B1ATI9	Gas7		Gas7	Mus musculus	10090		1
LIM domain-binding protein 3	O75112	LDB3	KIAA0613 ZASP	LDB3 KIAA0613 ZASP	Homo sapiens	9606		1	Z disc actin binding actin cytoskeleton organization adherens junction cytoskeletal protein binding cytoskeleton filamentous actin heart development metal ion binding muscle alpha-actinin binding muscle structure development perinuclear region of cytoplasm protein kinase C binding pseudopodium sarcomere organization stress fiber	GO:0001725 GO:0003779 GO:0005080 GO:0005856 GO:0005912 GO:0007507 GO:0008092 GO:0030018 GO:0030036 GO:0031143 GO:0031941 GO:0045214 GO:0046872 GO:0048471 GO:0051371 GO:0061061
Keratin, type II cytoskeletal 7	P08729	KRT7	SCL	KRT7 SCL	Homo sapiens	9606	1	1	cytoplasm cytosol extracellular exosome intermediate filament intermediate filament cytoskeleton intermediate filament organization keratin filament keratinization nucleus structural constituent of skin epidermis	GO:0005634 GO:0005737 GO:0005829 GO:0005882 GO:0030280 GO:0031424 GO:0045095 GO:0045109 GO:0045111 GO:0070062
Membrane protein UL56	Q21328	CELE_K08D8.2		CELE_K08D8.2	Caenorhabditis elegans	6239	1	1	membrane	GO:0016020
Ribosomal protein L10A (Fragment)	A0A3B2W824	Rpl10a		Rpl10a	Mus musculus	10090		1
Sorting nexin-2	O60749	SNX2		SNX2	Homo sapiens	9606	1	1	cadherin binding cytoplasm cytosol early endosome membrane early endosome to Golgi transport endosome endosome membrane epidermal growth factor receptor binding identical protein binding insulin receptor binding intracellular protein transport lamellipodium lamellipodium morphogenesis leptin receptor binding lysosome membrane phosphatidylinositol binding protein heterodimerization activity protein homodimerization activity protein-containing complex retrograde transport, endosome to Golgi retromer complex retromer, tubulation complex transferrin receptor binding	GO:0005154 GO:0005158 GO:0005737 GO:0005764 GO:0005768 GO:0005829 GO:0006886 GO:0010008 GO:0016020 GO:0030027 GO:0030904 GO:0030905 GO:0031901 GO:0032991 GO:0034498 GO:0035091 GO:0042147 GO:0042802 GO:0042803 GO:0045296 GO:0046982 GO:0072673 GO:1990459 GO:1990460
LOC501546 protein (Fragment)	Q5RJQ1	LOC501546		LOC501546	Rattus norvegicus	10116		1
Mitogen-activated protein kinase 15	Q8TD08	MAPK15	ERK7 ERK8	MAPK15 ERK7 ERK8	Homo sapiens	9606		1	ATP binding DNA damage response Golgi apparatus MAP kinase activity SH3 domain binding autophagosome bicellular tight junction cell-cell junction centriole chromatin binding ciliary basal body cytoplasm cytoplasmic vesicle dopamine uptake endoplasmic reticulum organization extracellular region intracellular signal transduction kinase activity meiotic spindle negative regulation of cell migration nucleus positive regulation of cell population proliferation positive regulation of metaphase/anaphase transition of meiosis I positive regulation of spindle assembly positive regulation of telomerase activity positive regulation of telomere capping positive regulation of telomere maintenance via telomerase protein autophosphorylation protein kinase activity protein localization to ciliary transition zone protein serine kinase activity protein serine/threonine kinase activity regulation of COPII vesicle coating regulation of autophagy regulation of cilium assembly	GO:0003400 GO:0003682 GO:0004672 GO:0004674 GO:0004707 GO:0005524 GO:0005576 GO:0005634 GO:0005737 GO:0005776 GO:0005794 GO:0005814 GO:0005911 GO:0005923 GO:0006974 GO:0007029 GO:0008284 GO:0010506 GO:0016301 GO:0017124 GO:0030336 GO:0031410 GO:0032212 GO:0035556 GO:0036064 GO:0046777 GO:0051973 GO:0072687 GO:0090494 GO:0106310 GO:1902017 GO:1904355 GO:1904491 GO:1905188 GO:1905832