GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name	UniProt ID	Gene Symbol	Gene Symbol Aliases	Gene Symbol All	Species	Taxonomy ID	No. of Glycosylation Sites	GO Labels	GO IDs
TPR_REGION domain-containing protein	Q95XX8	CELE_Y54G2A.11		CELE_Y54G2A.11	Caenorhabditis elegans	6239	1	membrane	GO:0016020
Rhodopsin (Fragment)	A0A1B3IJH2	RHO		RHO	Chrysopelea ornata	1296673	2	G protein-coupled receptor activity membrane metal ion binding photoreceptor activity phototransduction visual perception	GO:0004930 GO:0007601 GO:0007602 GO:0009881 GO:0016020 GO:0046872
Cathepsin D	A0A6J2BXP3	CTSD		CTSD	Zalophus californianus	9704	2	aspartic-type endopeptidase activity extracellular space lysosome proteolysis	GO:0004190 GO:0005615 GO:0005764 GO:0006508
Pre-glycoprotein polyprotein GP complex	A0A3G2CGX0	GPC		GPC	Mammarenavirus lassaense	3052310	11	fusion of virus membrane with host endosome membrane host cell Golgi membrane host cell endoplasmic reticulum membrane host cell plasma membrane membrane metal ion binding receptor-mediated endocytosis of virus by host cell viral envelope virion attachment to host cell virion membrane	GO:0016020 GO:0019031 GO:0019062 GO:0019065 GO:0020002 GO:0039654 GO:0044167 GO:0044178 GO:0046872 GO:0055036
Growth/differentiation factor 3	Q9NR23	GDF3		GDF3	Homo sapiens	9606	2	cytokine activity cytoplasm endoderm development extracellular space eye development formation of anatomical boundary growth factor activity in utero embryonic development mesoderm development negative regulation of BMP signaling pathway negative regulation of epidermal cell differentiation negative regulation of myoblast differentiation notochord development positive regulation of fat cell differentiation primitive streak formation protein kinase binding regulation of cell fate commitment response to dietary excess skeletal system development somite rostral/caudal axis specification	GO:0001501 GO:0001654 GO:0001701 GO:0002021 GO:0005125 GO:0005615 GO:0005737 GO:0007492 GO:0007498 GO:0008083 GO:0010453 GO:0019901 GO:0030514 GO:0030903 GO:0032525 GO:0045600 GO:0045605 GO:0045662 GO:0048859 GO:0090009
Xyloglucan endotransglucosylase/hydrolase	A0A059CW58	EUGRSUZ_C03800		EUGRSUZ_C03800	Eucalyptus grandis	71139	1	apoplast cell wall biogenesis cell wall organization hydrolase activity, hydrolyzing O-glycosyl compounds xyloglucan metabolic process xyloglucan:xyloglucosyl transferase activity	GO:0004553 GO:0010411 GO:0016762 GO:0042546 GO:0048046 GO:0071555
Non-structural glycoprotein 4	A0A7M3VAP2	NSP4		NSP4	Rotavirus A	28875	2	extracellular region host caveola host cell rough endoplasmic reticulum membrane induction by virus of host autophagy membrane metal ion binding monoatomic ion channel activity protein complex oligomerization toxin activity virus-mediated pore formation in host cell membrane	GO:0005216 GO:0005576 GO:0016020 GO:0039520 GO:0039707 GO:0044155 GO:0044169 GO:0046872 GO:0051259 GO:0090729
Matrix protein 2	H2KC30	M2	M	M2 M	Influenza A virus (A/HaNoi/HN30108/2004(H3N2))	1052380	1	host cell plasma membrane membrane monoatomic ion channel activity protein complex oligomerization proton transmembrane transporter activity suppression by virus of host autophagy virion membrane virus-mediated pore formation in host cell membrane	GO:0005216 GO:0015078 GO:0016020 GO:0020002 GO:0039521 GO:0039707 GO:0051259 GO:0055036
Peptidyl-glycine alpha-amidating monooxygenase	A0A218UDF4	PAM		PAM	Lonchura striata domestica	299123	1	copper ion binding peptide metabolic process peptidylamidoglycolate lyase activity peptidylglycine monooxygenase activity transport vesicle membrane	GO:0004504 GO:0004598 GO:0005507 GO:0006518 GO:0030658
Rhodopsin (Fragment)	A0A7D5ULQ2	RH1		RH1	Gymnocranius frenatus	2578286	1	G protein-coupled receptor activity membrane metal ion binding photoreceptor activity photoreceptor outer segment phototransduction visual perception	GO:0001750 GO:0004930 GO:0007601 GO:0007602 GO:0009881 GO:0016020 GO:0046872