GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name	UniProt ID	Gene Symbol	Gene Symbol Aliases	Gene Symbol All	Species	Taxonomy ID	No. of Glycosylation Sites	No. of GlyTouCan IDs	GO Labels	GO IDs
Non-structural glycoprotein 4	D1GG63	NSP4		NSP4	Rotavirus A human/Bethesda/DC139/1976/G3P[8]	641329	2		extracellular region host caveola host cell rough endoplasmic reticulum membrane induction by virus of host autophagy membrane metal ion binding monoatomic ion channel activity protein complex oligomerization toxin activity virus-mediated pore formation in host cell membrane	GO:0005216 GO:0005576 GO:0016020 GO:0039520 GO:0039707 GO:0044155 GO:0044169 GO:0046872 GO:0051259 GO:0090729
Voltage-dependent L-type calcium channel subunit alpha	A0A2U3WEB7	CACNA1C		CACNA1C	Odobenus rosmarus divergens	9708	1		T-tubule calmodulin binding dendrite metal ion binding perikaryon postsynaptic density membrane regulation of monoatomic ion transmembrane transport voltage-gated calcium channel activity voltage-gated calcium channel complex	GO:0005245 GO:0005516 GO:0005891 GO:0030315 GO:0030425 GO:0034765 GO:0043204 GO:0046872 GO:0098839
Subtilisin-like protease 2	Q64K35	SUB2		SUB2	Trichophyton benhamiae	63400	4		extracellular region proteolysis serine-type endopeptidase activity	GO:0004252 GO:0005576 GO:0006508
Phosphoinositide phospholipase C	A0A6J0U1D8	PLCD3		PLCD3	Pogona vitticeps	103695	1		calcium ion binding intracellular signal transduction lipid catabolic process phosphatidylinositol phospholipase C activity	GO:0004435 GO:0005509 GO:0016042 GO:0035556
Matrix protein 2	A0A0X8EH57	M2	M	M2 M	Influenza A virus (A/Alaska/246/2015(H3N2))	1788579	1		host cell plasma membrane membrane monoatomic ion channel activity protein complex oligomerization proton transmembrane transporter activity suppression by virus of host autophagy virion membrane virus-mediated pore formation in host cell membrane	GO:0005216 GO:0015078 GO:0016020 GO:0020002 GO:0039521 GO:0039707 GO:0051259 GO:0055036
Matrix protein 2	C5MUC1	M2	M	M2 M	Influenza A virus (A/swine/Hong Kong/NS1659/2001(H1N1))	649626	1		host cell plasma membrane membrane monoatomic ion channel activity protein complex oligomerization proton transmembrane transporter activity suppression by virus of host autophagy virion membrane virus-mediated pore formation in host cell membrane	GO:0005216 GO:0015078 GO:0016020 GO:0020002 GO:0039521 GO:0039707 GO:0051259 GO:0055036
T cell receptor alpha variable 9-2	A0A087WT02	TRAV9-2		TRAV9-2	Homo sapiens	9606	1		T cell receptor complex adaptive immune response	GO:0002250 GO:0042101
Immunoglobulin domain-containing protein WRK-1B	Q8WR43	wrk-1		wrk-1	Caenorhabditis elegans	6239	2
NTF2-related export protein 2	Q9NPJ8	NXT2		NXT2	Homo sapiens	9606		1	cytosol mRNA export from nucleus nuclear RNA export factor complex nuclear pore central transport channel nucleoplasm nucleus perinuclear region of cytoplasm poly(A)+ mRNA export from nucleus protein transport	GO:0005634 GO:0005654 GO:0005829 GO:0006406 GO:0015031 GO:0016973 GO:0042272 GO:0044613 GO:0048471
BMS1 homolog, ribosome assembly protein (Yeast)	Q6PGF5	Bms1		Bms1	Mus musculus	10090		1	90S preribosome GTP binding GTPase activity U3 snoRNA binding chromosome endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) nucleolus nucleoplasm ribosomal small subunit biogenesis small-subunit processome	GO:0000462 GO:0000479 GO:0003924 GO:0005525 GO:0005654 GO:0005694 GO:0005730 GO:0030686 GO:0032040 GO:0034511 GO:0042274