GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name	UniProt ID	Gene Symbol	Gene Symbol Aliases ▲	Gene Symbol All	Species	Taxonomy ID	No. of Glycosylation Sites	GO Labels	GO IDs
Protein Wnt-8a	P51028	wnt8a	wnt-8 wnt8	wnt8a wnt-8 wnt8	Danio rerio	7955	4	Spemann organizer formation Wnt signaling pathway Wnt signaling pathway involved in dorsal/ventral axis specification anterior/posterior pattern specification apoptotic body brain segmentation canonical Wnt signaling pathway canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation cell fate commitment cell migration involved in gastrulation cell proliferation involved in pronephros development cell surface central nervous system development cytokine activity determination of dorsal identity dorsal/ventral pattern formation ectoderm development embryonic axis specification endoderm development extracellular space eye development frizzled binding hindbrain development mesoderm development mesoderm formation mesodermal cell fate commitment negative regulation of canonical Wnt signaling pathway neural crest cell fate specification neural plate anterior/posterior regionalization neural plate pattern specification neuron differentiation notochord development positive regulation of canonical Wnt signaling pathway positive regulation of fibroblast growth factor receptor signaling pathway positive regulation of gene expression post-anal tail morphogenesis regulation of anterior head development regulation of cell population proliferation somitogenesis spinal cord anterior/posterior patterning	GO:0000578 GO:0001654 GO:0001707 GO:0001710 GO:0001756 GO:0005109 GO:0005125 GO:0005615 GO:0007398 GO:0007417 GO:0007492 GO:0007498 GO:0009952 GO:0009953 GO:0009986 GO:0010628 GO:0014036 GO:0016055 GO:0021512 GO:0021999 GO:0030182 GO:0030902 GO:0030903 GO:0035284 GO:0036342 GO:0039015 GO:0042074 GO:0042127 GO:0044332 GO:0045165 GO:0045743 GO:0048263 GO:0060061 GO:0060070 GO:0060823 GO:0060896 GO:0090090 GO:0090263 GO:0097189 GO:2000742
Protein Wnt-8b	P51029	wnt8b	wnt-8b	wnt8b wnt-8b	Danio rerio	7955	4	canonical Wnt signaling pathway cell fate commitment commissural neuron axon guidance cytokine activity embryonic pattern specification extracellular space eye development eye field cell fate commitment involved in camera-type eye formation forebrain development forebrain neuron differentiation frizzled binding hypothalamus development negative regulation of anterior neural cell fate commitment of the neural plate by Wnt signaling pathway neuron differentiation otic placode formation sensory epithelium regeneration	GO:0001654 GO:0005109 GO:0005125 GO:0005615 GO:0009880 GO:0021854 GO:0021879 GO:0022002 GO:0030182 GO:0030900 GO:0043049 GO:0045165 GO:0060070 GO:0060898 GO:0070654 GO:0071679
Protein Wnt-11b-2	Q28J82	wnt11b-2	wnt11 wnt11b	wnt11b-2 wnt11 wnt11b	Xenopus tropicalis	8364	4	Wnt signaling pathway extracellular region gastrulation signaling receptor binding	GO:0005102 GO:0005576 GO:0007369 GO:0016055
Protein Wnt-11b-1	Q66II0	wnt11b-1	wnt11	wnt11b-1 wnt11	Xenopus tropicalis	8364	4	Wnt signaling pathway extracellular region gastrulation signaling receptor binding	GO:0005102 GO:0005576 GO:0007369 GO:0016055
Protein Wnt-11	B2GUT4	wnt11	wnt11r	wnt11 wnt11r	Xenopus tropicalis	8364	4	GTPase activator activity cell migration involved in gastrulation cytoplasm dorsal fin development embryonic viscerocranium morphogenesis extracellular region heart looping heart morphogenesis negative regulation of DNA-templated transcription negative regulation of canonical Wnt signaling pathway negative regulation of cell growth negative regulation of cell migration neural crest cell migration neuroendocrine cell differentiation neuromast development non-canonical Wnt signaling pathway pharyngeal system development positive regulation of DNA-templated transcription positive regulation of GTPase activity positive regulation of JNK cascade positive regulation of protein kinase C signaling positive regulation of stress fiber assembly pronephros development protein kinase activator activity protein localization to cell surface protein phosphorylation regulation of gastrulation secondary palate development signal transduction signaling receptor binding	GO:0001755 GO:0001947 GO:0003007 GO:0005096 GO:0005102 GO:0005576 GO:0005737 GO:0006468 GO:0007165 GO:0010470 GO:0030295 GO:0030308 GO:0030336 GO:0033337 GO:0034394 GO:0035567 GO:0042074 GO:0043547 GO:0045892 GO:0045893 GO:0046330 GO:0048703 GO:0048793 GO:0048884 GO:0051496 GO:0060037 GO:0061101 GO:0062009 GO:0090037 GO:0090090
Protein Wnt-11	Q670P5	wnt11	wnt11r	wnt11 wnt11r	Xenopus laevis	8355	3	dorsal fin development embryonic axis specification extracellular region gastrulation heart morphogenesis negative regulation of canonical Wnt signaling pathway neural crest cell migration non-canonical Wnt signaling pathway positive regulation of JNK cascade pronephros development regulation of gastrulation signaling receptor binding	GO:0000578 GO:0001755 GO:0003007 GO:0005102 GO:0005576 GO:0007369 GO:0010470 GO:0033337 GO:0035567 GO:0046330 GO:0048793 GO:0090090
Protein Wnt-2b-B (Fragment)	P31283	wnt2b-b	wnt2	wnt2b-b wnt2	Xenopus laevis	8355	1	Wnt signaling pathway extracellular region signaling receptor binding	GO:0005102 GO:0005576 GO:0016055
Protein Wnt-5b	P33945	wnt5b	wnt5c	wnt5b wnt5c	Xenopus laevis	8355	4	Wnt signaling pathway extracellular region muscle cell differentiation positive regulation of convergent extension involved in gastrulation positive regulation of non-canonical Wnt signaling pathway signaling receptor binding	GO:0005102 GO:0005576 GO:0016055 GO:0042692 GO:1904105 GO:2000052
Noggin	Q6NV45	fc23h06	wu:fc23h06 zNog1	fc23h06 wu:fc23h06 zNog1	Danio rerio	7955	1	cartilage development cell differentiation extracellular region negative regulation of BMP signaling pathway negative regulation of cell differentiation	GO:0005576 GO:0030154 GO:0030514 GO:0045596 GO:0051216
Ephrin type-B receptor 1-A	Q91571	ephb1-a	xek	ephb1-a xek	Xenopus laevis	8355	3	ATP binding axon guidance cell chemotaxis cell-substrate adhesion dendrite dendritic spine development dendritic spine morphogenesis early endosome membrane ephrin receptor signaling pathway establishment of cell polarity plasma membrane positive regulation of synapse assembly protein autophosphorylation regulation of ERK1 and ERK2 cascade regulation of JNK cascade transmembrane-ephrin receptor activity	GO:0005005 GO:0005524 GO:0005886 GO:0007411 GO:0030010 GO:0030425 GO:0031589 GO:0031901 GO:0046328 GO:0046777 GO:0048013 GO:0051965 GO:0060326 GO:0060996 GO:0060997 GO:0070372