GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID Gene Symbol Gene Symbol Aliases Gene Symbol All Species Taxonomy ID No. of Glycosylation Sites No. of GlyTouCan IDs ▲ MCAW IDs Disease Name Aliases Disease Name GO Labels GO IDs
  • METTL15
  • METT5D1
  • METTL15
  • METT5D1
9606
1
1
  • mitochondrial matrix
  • mitochondrion
  • rRNA (cytosine-N4-)-methyltransferase activity
  • rRNA base methylation
  • GO:0005739
  • GO:0005759
  • GO:0070475
  • GO:0071424
  • Lrrc4b
  • Lrig4
  • Lrrc4b
  • Lrig4
10090
9
1
  • cerebellar mossy fiber
  • glutamatergic synapse
  • plasma membrane
  • positive regulation of synapse assembly
  • postsynaptic density membrane
  • presynaptic membrane
  • regulation of postsynaptic density assembly
  • regulation of presynapse assembly
  • signaling receptor binding
  • synaptic membrane adhesion
  • GO:0005102
  • GO:0005886
  • GO:0042734
  • GO:0044300
  • GO:0051965
  • GO:0098839
  • GO:0098978
  • GO:0099151
  • GO:0099560
  • GO:1905606
  • WOX4
  • WUSCHEL related homeobox 4
  • WOX4
  • WUSCHEL related homeobox 4
3702
1
  • DNA binding
  • DNA-binding transcription factor activity
  • cell division
  • nucleus
  • phloem or xylem histogenesis
  • procambium histogenesis
  • GO:0003677
  • GO:0003700
  • GO:0005634
  • GO:0010067
  • GO:0010087
  • GO:0051301
  • Nol8
  • Nol8
10090
1
  • RNA binding
  • cellular response to leukemia inhibitory factor
  • chromosome
  • nucleolus
  • protein localization to nucleolus
  • rRNA processing
  • GO:0003723
  • GO:0005694
  • GO:0005730
  • GO:0006364
  • GO:1902570
  • GO:1990830
  • SNRPG
  • PBSCG
  • SNRPG
  • PBSCG
9606
1
  • 7-methylguanosine cap hypermethylation
  • P granule
  • RNA binding
  • RNA splicing
  • SMN-Sm protein complex
  • U1 snRNP
  • U12-type spliceosomal complex
  • U2 snRNP
  • U2-type catalytic step 2 spliceosome
  • U2-type precatalytic spliceosome
  • U2-type prespliceosome
  • U2-type prespliceosome assembly
  • U4 snRNP
  • U4/U6 x U5 tri-snRNP complex
  • U5 snRNP
  • U7 snRNP
  • catalytic step 2 spliceosome
  • cytosol
  • mRNA splicing, via spliceosome
  • methylosome
  • nucleoplasm
  • nucleus
  • precatalytic spliceosome
  • small nuclear ribonucleoprotein complex
  • spliceosomal complex
  • spliceosomal complex assembly
  • spliceosomal snRNP assembly
  • spliceosomal tri-snRNP complex
  • GO:0000245
  • GO:0000387
  • GO:0000398
  • GO:0003723
  • GO:0005634
  • GO:0005654
  • GO:0005681
  • GO:0005682
  • GO:0005683
  • GO:0005685
  • GO:0005686
  • GO:0005687
  • GO:0005689
  • GO:0005829
  • GO:0008380
  • GO:0030532
  • GO:0034709
  • GO:0034719
  • GO:0036261
  • GO:0043186
  • GO:0046540
  • GO:0071004
  • GO:0071005
  • GO:0071007
  • GO:0071011
  • GO:0071013
  • GO:0097526
  • GO:1903241
  • C2cd4c
  • Fam148c
  • Nlf3
  • C2cd4c
  • Fam148c
  • Nlf3
10090
1
  • cytosol
  • GO:0005829
  • PEX11A
  • PEX11
  • PEX11A
  • PEX11
9606
1
  • brown fat cell differentiation
  • peroxisomal membrane
  • peroxisome
  • peroxisome fission
  • peroxisome membrane biogenesis
  • peroxisome organization
  • protein homodimerization activity
  • protein-containing complex
  • regulation of peroxisome size
  • signal transduction
  • GO:0005777
  • GO:0005778
  • GO:0007031
  • GO:0007165
  • GO:0016557
  • GO:0016559
  • GO:0032991
  • GO:0042803
  • GO:0044375
  • GO:0050873
  • G3bp2
  • G3bp2
10090
1
  • RNA binding
  • GO:0003723
  • OtopLa
  • CG11473
  • CG17761
  • Dmel\CG42492
  • anon-WO0140519.181
  • dmOTOPLa
  • dm_OtopLa
  • OtopLa
  • CG11473
  • CG17761
  • Dmel\CG42492
  • anon-WO0140519.181
  • dmOTOPLa
  • dm_OtopLa
7227
1
  • detection of chemical stimulus involved in sensory perception of sour taste
  • plasma membrane
  • proton channel activity
  • proton transmembrane transport
  • sour taste receptor activity
  • GO:0001581
  • GO:0005886
  • GO:0015252
  • GO:0033040
  • GO:1902600
  • At1g33050
  • At1g33050
3702
1
Displaying entries 131 - 140 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01