GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name	UniProt ID	Gene Symbol	Gene Symbol Aliases	Gene Symbol All	Species	Taxonomy ID	No. of Glycosylation Sites	No. of GlyTouCan IDs ▲	GO Labels	GO IDs
NACHT, LRR and PYD domains-containing protein 2	Q9NX02	NLRP2	NALP2 NBS1 PAN1 PYPAF2	NLRP2 NALP2 NBS1 PAN1 PYPAF2	Homo sapiens	9606	1	1	ATP binding Golgi apparatus Pyrin domain binding apoptotic process cytoplasm cytosol inflammatory response innate immune response intracellular membrane-bounded organelle negative regulation of non-canonical NF-kappaB signal transduction positive regulation of cysteine-type endopeptidase activity involved in apoptotic process positive regulation of interleukin-1 beta production regulation of inflammatory response	GO:0005524 GO:0005737 GO:0005794 GO:0005829 GO:0006915 GO:0006954 GO:0032090 GO:0032731 GO:0043231 GO:0043280 GO:0045087 GO:0050727 GO:1901223
Rho GTPase-activating protein 39	P59281	Arhgap39	D15Wsu169e Kiaa1688	Arhgap39 D15Wsu169e Kiaa1688	Mus musculus	10090	1	1	GTPase activator activity cytoplasm cytoskeleton glutamatergic synapse nucleus postsynapse postsynapse organization signal transduction	GO:0005096 GO:0005634 GO:0005737 GO:0005856 GO:0007165 GO:0098794 GO:0098978 GO:0099173
Signal recognition particle receptor subunit beta	P47758	Srprb		Srprb	Mus musculus	10090		1	GTP binding SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition cytoplasm cytoplasmic microtubule membrane protein targeting to ER signal recognition particle receptor complex ubiquitin protein ligase binding	GO:0005525 GO:0005737 GO:0005785 GO:0005881 GO:0006617 GO:0016020 GO:0031625 GO:0045047
Phosphoribosylpyrophosphate synthetase	Q4DZP3	Tc00.1047053504147.10		Tc00.1047053504147.10	Trypanosoma cruzi strain CL Brener	353153		1
3-hydroxyacyl-CoA dehydrogenase C-terminal domain-containing protein (Fragment)	K2NTN6	MOQ_003819		MOQ_003819	Trypanosoma cruzi marinkellei	85056		1
SPHK1 interactor, AKAP domain containing	E9PUC4	Sphkap		Sphkap	Mus musculus	10090		1	protein kinase A binding	GO:0051018
Histone-arginine methyltransferase CARM1	Q86X55	CARM1	PRMT4	CARM1 PRMT4	Homo sapiens	9606		1	DNA-binding transcription factor binding beta-catenin binding cytoplasm cytosol histone H3R17 methyltransferase activity histone H3R2 methyltransferase activity histone arginine N-methyltransferase activity histone methylation histone methyltransferase activity lysine-acetylated histone binding negative regulation of dendrite development nuclear receptor coactivator activity nuclear replication fork nucleoplasm nucleus positive regulation of cell population proliferation positive regulation of epithelial cell apoptotic process positive regulation of fat cell differentiation positive regulation of transcription by RNA polymerase I protein methyltransferase activity protein-arginine N-methyltransferase activity protein-arginine omega-N asymmetric methyltransferase activity regulation of DNA-templated transcription regulation of intracellular estrogen receptor signaling pathway replication fork reversal response to cAMP transcription cis-regulatory region binding transcription coactivator activity	GO:0000976 GO:0003713 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006355 GO:0008013 GO:0008276 GO:0008284 GO:0008469 GO:0016274 GO:0016571 GO:0030374 GO:0033146 GO:0035242 GO:0035642 GO:0042054 GO:0043596 GO:0045600 GO:0045943 GO:0051591 GO:0070577 GO:0070611 GO:0071932 GO:0140297 GO:1904037 GO:2000171
Protein PBDC1	Q9BVG4	PBDC1	CXorf26	PBDC1 CXorf26	Homo sapiens	9606		1
BRISC and BRCA1-A complex member 1	Q9NWV8	BABAM1	C19orf62 MERIT40 NBA1	BABAM1 C19orf62 MERIT40 NBA1	Homo sapiens	9606		1	BRCA1-A complex BRISC complex DNA repair-dependent chromatin remodeling cell division cytoplasm cytosol double-strand break repair hematopoietic stem cell proliferation mitotic G2 DNA damage checkpoint signaling mitotic G2/M transition checkpoint nuclear body nucleoplasm nucleus positive regulation of DNA repair regulation of DNA repair response to ionizing radiation	GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006282 GO:0006302 GO:0007095 GO:0010212 GO:0016604 GO:0044818 GO:0045739 GO:0051301 GO:0070531 GO:0070552 GO:0071425 GO:0140861
Neurofilament heavy polypeptide	P16884	Nefh	Nfh	Nefh Nfh	Rattus norvegicus	10116	3	1	Schaffer collateral - CA1 synapse apical dendrite axon axon development axon regeneration basal proximal dendrite cellular response to estradiol stimulus cellular response to hydroperoxide cellular response to leukemia inhibitory factor cellular response to oxidative stress cerebral cortex development cytoplasm cytoskeleton hippocampus development intermediate filament intermediate filament bundle assembly intermediate filament cytoskeleton organization microtubule cytoskeleton organization neurofibrillary tangle neurofilament neurofilament bundle assembly neurofilament cytoskeleton organization neuron projection development neuronal cell body ovarian follicle atresia perikaryon peripheral nervous system neuron axonogenesis postsynapse postsynaptic density postsynaptic intermediate filament cytoskeleton postsynaptic modulation of chemical synaptic transmission protein kinase binding protein-containing complex binding protein-macromolecule adaptor activity regulation of organelle transport along microtubule response to acrylamide response to cocaine response to sodium arsenite spinal cord development structural constituent of cytoskeleton structural constituent of postsynaptic intermediate filament cytoskeleton toxic substance binding	GO:0000226 GO:0001552 GO:0005200 GO:0005737 GO:0005856 GO:0005882 GO:0005883 GO:0014069 GO:0015643 GO:0019901 GO:0021510 GO:0021766 GO:0021987 GO:0030424 GO:0030674 GO:0031103 GO:0031175 GO:0033693 GO:0034599 GO:0042220 GO:0043025 GO:0043204 GO:0044877 GO:0045104 GO:0045110 GO:0048936 GO:0060052 GO:0061564 GO:0071392 GO:0071447 GO:0097418 GO:0097440 GO:0098685 GO:0098794 GO:0099160 GO:0099170 GO:0099184 GO:0150017 GO:1902513 GO:1903935 GO:1903937 GO:1990830