GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID Gene Symbol Gene Symbol Aliases Gene Symbol All Species Taxonomy ID No. of Glycosylation Sites No. of GlyTouCan IDs ▲ MCAW IDs Disease Name Aliases Disease Name GO Labels GO IDs
  • RSL24D1
  • C15orf15
  • RPL24L
  • RSL24D1
  • C15orf15
  • RPL24L
9606
1
  • nucleolus
  • nucleoplasm
  • ribosomal large subunit biogenesis
  • ribosome
  • structural constituent of ribosome
  • translation
  • GO:0003735
  • GO:0005654
  • GO:0005730
  • GO:0005840
  • GO:0006412
  • GO:0042273
  • Virma
  • Kiaa1429
  • Virma
  • Kiaa1429
10090
2
1
  • RNA N6-methyladenosine methyltransferase complex
  • RNA splicing
  • cytoplasm
  • cytosol
  • mRNA alternative polyadenylation
  • mRNA methylation
  • nuclear body
  • nuclear speck
  • nucleoplasm
  • nucleus
  • GO:0005634
  • GO:0005654
  • GO:0005737
  • GO:0005829
  • GO:0008380
  • GO:0016604
  • GO:0016607
  • GO:0036396
  • GO:0080009
  • GO:0110104
  • Gja5
  • Cxn-40
  • Gja5
  • Cxn-40
10090
1
  • AV node cell to bundle of His cell communication
  • AV node cell to bundle of His cell communication by electrical coupling
  • SA node cell action potential
  • artery morphogenesis
  • atrial cardiac muscle cell to AV node cell communication by electrical coupling
  • atrial septum development
  • atrial septum morphogenesis
  • atrial ventricular junction remodeling
  • blood vessel development
  • blood vessel diameter maintenance
  • bundle of His cell to Purkinje myocyte communication by electrical coupling
  • cardiac conduction
  • cardiac conduction system development
  • cell communication by chemical coupling
  • cell communication by electrical coupling
  • cell communication by electrical coupling involved in cardiac conduction
  • cell communication involved in cardiac conduction
  • cell projection
  • cell-cell signaling
  • connexin binding
  • connexin complex
  • disordered domain specific binding
  • embryonic heart tube development
  • embryonic limb morphogenesis
  • foramen ovale closure
  • gap junction
  • gap junction assembly
  • gap junction channel activity
  • gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling
  • gap junction channel activity involved in atrial cardiac muscle cell-AV node cell electrical coupling
  • gap junction channel activity involved in bundle of His cell-Purkinje myocyte electrical coupling
  • gap junction channel activity involved in cardiac conduction electrical coupling
  • gap junction hemi-channel activity
  • heart development
  • intercalated disc
  • mitral valve development
  • negative regulation of blood pressure
  • negative regulation of glomerular filtration
  • outflow tract morphogenesis
  • plasma membrane
  • positive regulation of cell communication by chemical coupling
  • positive regulation of vasoconstriction
  • potassium ion transport
  • pulmonary valve formation
  • regulation of AV node cell action potential
  • regulation of Purkinje myocyte action potential
  • regulation of atrial cardiac muscle cell action potential
  • regulation of atrial cardiac muscle cell membrane depolarization
  • regulation of bundle of His cell action potential
  • regulation of cardiac muscle contraction
  • regulation of cell communication by electrical coupling
  • regulation of heart rate by cardiac conduction
  • regulation of membrane depolarization during cardiac muscle cell action potential
  • regulation of renin secretion into blood stream
  • regulation of systemic arterial blood pressure
  • regulation of ventricular cardiac muscle cell membrane depolarization
  • regulation of ventricular cardiac muscle cell membrane repolarization
  • renal system process involved in regulation of systemic arterial blood pressure
  • septum primum development
  • skeletal system development
  • vasodilation
  • vasomotion
  • ventricular cardiac muscle cell action potential
  • ventricular septum development
  • ventricular septum morphogenesis
  • GO:0001501
  • GO:0001568
  • GO:0003071
  • GO:0003073
  • GO:0003105
  • GO:0003151
  • GO:0003161
  • GO:0003174
  • GO:0003193
  • GO:0003281
  • GO:0003283
  • GO:0003284
  • GO:0003294
  • GO:0005243
  • GO:0005886
  • GO:0005921
  • GO:0005922
  • GO:0006813
  • GO:0007267
  • GO:0007507
  • GO:0010643
  • GO:0010644
  • GO:0010649
  • GO:0010652
  • GO:0014704
  • GO:0016264
  • GO:0030326
  • GO:0035050
  • GO:0035922
  • GO:0042311
  • GO:0042995
  • GO:0045776
  • GO:0045907
  • GO:0048844
  • GO:0055077
  • GO:0055117
  • GO:0060307
  • GO:0060371
  • GO:0060373
  • GO:0060412
  • GO:0060413
  • GO:0061337
  • GO:0071253
  • GO:0086005
  • GO:0086015
  • GO:0086044
  • GO:0086053
  • GO:0086054
  • GO:0086064
  • GO:0086065
  • GO:0086067
  • GO:0086075
  • GO:0086076
  • GO:0086077
  • GO:0086078
  • GO:0086091
  • GO:0097718
  • GO:0097746
  • GO:0098904
  • GO:0098905
  • GO:0098906
  • GO:0098910
  • GO:1900133
  • GO:1900825
  • GO:1990029
  • Mgst1
  • Mgst1
10090
1
  • apical part of cell
  • cellular response to lipid hydroperoxide
  • endoplasmic reticulum
  • endoplasmic reticulum membrane
  • glutathione binding
  • glutathione metabolic process
  • glutathione peroxidase activity
  • glutathione transferase activity
  • glutathione transport
  • identical protein binding
  • membrane
  • mitochondrial inner membrane
  • mitochondrial outer membrane
  • mitochondrion
  • peroxisomal membrane
  • response to lipopolysaccharide
  • response to organonitrogen compound
  • response to xenobiotic stimulus
  • GO:0004364
  • GO:0004602
  • GO:0005739
  • GO:0005741
  • GO:0005743
  • GO:0005778
  • GO:0005783
  • GO:0005789
  • GO:0006749
  • GO:0009410
  • GO:0010243
  • GO:0016020
  • GO:0032496
  • GO:0034635
  • GO:0042802
  • GO:0043295
  • GO:0045177
  • GO:0071449
  • Tc00.1047053511281.40
  • Tc00.1047053511281.40
353153
1
  • ATP binding
  • cholesterol biosynthetic process
  • cytosol
  • diphosphomevalonate decarboxylase activity
  • isopentenyl diphosphate biosynthetic process, mevalonate pathway
  • GO:0004163
  • GO:0005524
  • GO:0005829
  • GO:0006695
  • GO:0019287
  • TCDM_02356
  • TCDM_02356
1416333
1
  • metal ion binding
  • GO:0046872
  • CHD2
  • CHD2
9606
2
1
  • ATP binding
  • ATP hydrolysis activity
  • ATP-dependent chromatin remodeler activity
  • DNA binding
  • DNA damage response
  • RNA binding
  • RNA polymerase II cis-regulatory region sequence-specific DNA binding
  • chromatin
  • chromatin binding
  • gene expression
  • helicase activity
  • hematopoietic stem cell differentiation
  • histone binding
  • muscle organ development
  • nucleosome organization
  • nucleus
  • regulation of transcription by RNA polymerase II
  • GO:0000785
  • GO:0000978
  • GO:0003677
  • GO:0003682
  • GO:0003723
  • GO:0004386
  • GO:0005524
  • GO:0005634
  • GO:0006357
  • GO:0006974
  • GO:0007517
  • GO:0010467
  • GO:0016887
  • GO:0034728
  • GO:0042393
  • GO:0060218
  • GO:0140658
  • ZDHHC13
  • HIP14L
  • HIP3RP
  • ZDHHC13
  • HIP14L
  • HIP3RP
9606
1
  • Golgi membrane
  • Golgi-associated vesicle membrane
  • endoplasmic reticulum
  • magnesium ion transmembrane transporter activity
  • membrane
  • palmitoyltransferase activity
  • positive regulation of canonical NF-kappaB signal transduction
  • protein-cysteine S-palmitoyltransferase activity
  • GO:0000139
  • GO:0005783
  • GO:0015095
  • GO:0016020
  • GO:0016409
  • GO:0019706
  • GO:0030660
  • GO:0043123
  • ANKRD26
  • KIAA1074
  • ANKRD26
  • KIAA1074
9606
1
1
  • centrosome
  • negative regulation of fat cell differentiation
  • GO:0005813
  • GO:0045599
  • LRRC75B
  • C22orf36
  • FAM211B
  • LRRC75B
  • C22orf36
  • FAM211B
9606
1
1
Displaying entries 231 - 240 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01