GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID Gene Symbol ▼ Species Taxonomy ID No. of Glycosylation Sites GO Labels GO IDs
  • xth10
3659
1
  • apoplast
  • cell wall biogenesis
  • cell wall organization
  • hydrolase activity, hydrolyzing O-glycosyl compounds
  • xyloglucan metabolic process
  • xyloglucan:xyloglucosyl transferase activity
  • GO:0004553
  • GO:0010411
  • GO:0016762
  • GO:0042546
  • GO:0048046
  • GO:0071555
  • xth1
3218
1
  • cell wall biogenesis
  • hydrolase activity, hydrolyzing O-glycosyl compounds
  • xyloglucan metabolic process
  • xyloglucan:xyloglucosyl transferase activity
  • GO:0004553
  • GO:0010411
  • GO:0016762
  • GO:0042546
  • xth1
4577
1
  • apoplast
  • cell wall biogenesis
  • cell wall organization
  • hydrolase activity, hydrolyzing O-glycosyl compounds
  • xyloglucan metabolic process
  • xyloglucan:xyloglucosyl transferase activity
  • GO:0004553
  • GO:0010411
  • GO:0016762
  • GO:0042546
  • GO:0048046
  • GO:0071555
  • xth1
4113
1
  • apoplast
  • cell wall biogenesis
  • cell wall organization
  • hydrolase activity, hydrolyzing O-glycosyl compounds
  • xyloglucan metabolic process
  • xyloglucan:xyloglucosyl transferase activity
  • GO:0004553
  • GO:0010411
  • GO:0016762
  • GO:0042546
  • GO:0048046
  • GO:0071555
  • xt
51511
3
  • Golgi membrane
  • chondroitin sulfate biosynthetic process
  • endoplasmic reticulum membrane
  • heparan sulfate proteoglycan biosynthetic process
  • metal ion binding
  • protein xylosyltransferase activity
  • GO:0000139
  • GO:0005789
  • GO:0015012
  • GO:0030158
  • GO:0030206
  • GO:0046872
  • xt
7719
3
  • Golgi membrane
  • chondroitin sulfate biosynthetic process
  • chondroitin sulfate proteoglycan biosynthetic process
  • endoplasmic reticulum membrane
  • heparan sulfate proteoglycan biosynthetic process
  • metal ion binding
  • protein xylosyltransferase activity
  • GO:0000139
  • GO:0005789
  • GO:0015012
  • GO:0030158
  • GO:0030206
  • GO:0046872
  • GO:0050650
  • xptC
227321
5
  • flavin adenine dinucleotide binding
  • oxidoreductase activity
  • oxidoreductase activity, acting on CH-OH group of donors
  • secondary metabolite biosynthetic process
  • shamixanthone biosynthetic process
  • GO:0016491
  • GO:0016614
  • GO:0044550
  • GO:0050660
  • GO:1900793
  • xmrk
8083
10
  • ATP binding
  • ERBB signaling pathway
  • phosphorylation
  • plasma membrane region
  • regulation of cell population proliferation
  • transmembrane receptor protein tyrosine kinase activity
  • GO:0004714
  • GO:0005524
  • GO:0016310
  • GO:0038127
  • GO:0042127
  • GO:0098590
  • xlnD
105351
14
  • extracellular region
  • xylan 1,4-beta-xylosidase activity
  • xylan catabolic process
  • GO:0005576
  • GO:0009044
  • GO:0045493
  • xlnD
227321
12
  • alpha-L-arabinofuranosidase activity
  • arabinan catabolic process
  • extracellular region
  • xylan 1,4-beta-xylosidase activity
  • xylan catabolic process
  • GO:0005576
  • GO:0009044
  • GO:0031222
  • GO:0045493
  • GO:0046556
Displaying entries 91 - 100 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01