GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name	UniProt ID	Gene Symbol	Species	Taxonomy ID	GO Labels	GO IDs
Proteasome subunit alpha type-2	P25787	PSMA2	Homo sapiens	9606	P-body cytoplasm cytosol extracellular exosome extracellular region ficolin-1-rich granule lumen nucleoplasm nucleus proteasomal protein catabolic process proteasome complex proteasome core complex proteasome core complex, alpha-subunit complex proteasome-mediated ubiquitin-dependent protein catabolic process response to virus secretory granule lumen	GO:0000502 GO:0000932 GO:0005576 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005839 GO:0009615 GO:0010498 GO:0019773 GO:0034774 GO:0043161 GO:0070062 GO:1904813
Transmembrane protein	Q4D487	Tc00.1047053509317.80	Trypanosoma cruzi strain CL Brener	353153	membrane	GO:0016020
Ribonucleoside-diphosphate reductase	V5DH46	TCDM_04552	Trypanosoma cruzi Dm28c	1416333	ATP binding DNA replication deoxyribonucleotide biosynthetic process ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	GO:0004748 GO:0005524 GO:0006260 GO:0009263
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1	Q9H4L7	SMARCAD1	Homo sapiens	9606	ATP binding ATP hydrolysis activity ATP-dependent activity, acting on DNA ATP-dependent chromatin remodeler activity DNA binding DNA double-strand break processing chromatin binding chromatin remodeling chromosome separation helicase activity heterochromatin nuclear replication fork nucleoplasm nucleus regulation of DNA recombination site of double-strand break ubiquitin binding	GO:0000018 GO:0000729 GO:0000792 GO:0003677 GO:0003682 GO:0004386 GO:0005524 GO:0005634 GO:0005654 GO:0006338 GO:0008094 GO:0016887 GO:0035861 GO:0043130 GO:0043596 GO:0051304 GO:0140658
Ras-related protein Rab-8B	P61028	Rab8b	Mus musculus	10090	GDP binding GTP binding GTPase activity Golgi vesicle fusion to target membrane TPR domain binding antigen processing and presentation cell tip cell-substrate junction organization endocytic recycling endosome mitochondrion perinuclear region of cytoplasm peroxisomal membrane phagocytic vesicle phagocytic vesicle membrane plasma membrane positive regulation of cell projection organization positive regulation of corticotropin secretion presynapse protein import into peroxisome membrane protein localization to plasma membrane protein secretion regulation of exocytosis signaling receptor binding synaptic vesicle trans-Golgi network transport vesicle vesicle docking involved in exocytosis	GO:0003924 GO:0005102 GO:0005525 GO:0005739 GO:0005768 GO:0005778 GO:0005886 GO:0006904 GO:0008021 GO:0009306 GO:0017157 GO:0019003 GO:0019882 GO:0030140 GO:0030670 GO:0030911 GO:0031346 GO:0032456 GO:0045046 GO:0045335 GO:0048210 GO:0048471 GO:0051286 GO:0051461 GO:0072659 GO:0098793 GO:0150115
Ribosomal protein L3-like (Fragment)	S4R242	Rpl3l	Mus musculus	10090	ribonucleoprotein complex ribosome structural constituent of ribosome translation	GO:0003735 GO:0005840 GO:0006412 GO:1990904
Carnitine O-palmitoyltransferase 1, liver isoform	P32198	Cpt1a	Rattus norvegicus	10116	carnitine O-palmitoyltransferase activity carnitine metabolic process cellular response to fatty acid eating behavior epithelial cell differentiation fatty acid beta-oxidation fatty acid metabolic process glucose metabolic process identical protein binding liver regeneration long-chain fatty acid metabolic process mitochondrial outer membrane mitochondrion palmitoleoyltransferase activity positive regulation of fatty acid beta-oxidation regulation of fatty acid beta-oxidation regulation of fatty acid oxidation regulation of insulin secretion regulation of lipid storage response to alkaloid response to ethanol response to nutrient levels response to organic cyclic compound response to tetrachloromethane response to xenobiotic stimulus triglyceride metabolic process	GO:0001676 GO:0004095 GO:0005739 GO:0005741 GO:0006006 GO:0006631 GO:0006635 GO:0006641 GO:0009410 GO:0009437 GO:0010883 GO:0014070 GO:0030855 GO:0031667 GO:0031998 GO:0032000 GO:0042755 GO:0042802 GO:0043279 GO:0045471 GO:0046320 GO:0050796 GO:0071398 GO:0097421 GO:1904772 GO:1990698
Ubiquitin carboxyl-terminal hydrolase 51	Q70EK9	USP51	Homo sapiens	9606	DNA damage response DNA repair chromatin binding chromosome cysteine-type deubiquitinase activity histone H2A deubiquitinase activity histone binding protein deubiquitination regulation of cell cycle process regulation of double-strand break repair via homologous recombination regulation of double-strand break repair via nonhomologous end joining zinc ion binding	GO:0003682 GO:0004843 GO:0005694 GO:0006281 GO:0006974 GO:0008270 GO:0010564 GO:0010569 GO:0016579 GO:0042393 GO:0140950 GO:2001032
Glyceraldehyde-3-phosphate dehydrogenase 1	P07486	Gapdh1	Drosophila melanogaster	7227	M band NAD binding NADP binding Z disc cytosol glucose metabolic process glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity glycolytic process peptidyl-cysteine S-nitrosylase activity	GO:0004365 GO:0005829 GO:0006006 GO:0006096 GO:0030018 GO:0031430 GO:0035605 GO:0050661 GO:0051287
Phospholemman	Q9Z239	Fxyd1	Mus musculus	10090	ATPase binding T-tubule apical plasma membrane caveola intercalated disc myosin binding negative regulation of protein glutathionylation positive regulation of inorganic anion transmembrane transport positive regulation of organic acid transport positive regulation of sodium ion export across plasma membrane potassium ion transport regulation of cardiac muscle cell contraction regulation of cardiac muscle cell membrane potential regulation of cytosolic calcium ion concentration regulation of sodium ion transmembrane transporter activity sarcolemma sodium channel regulator activity sodium ion transport sodium:potassium-exchanging ATPase complex transmembrane transporter binding	GO:0005890 GO:0005901 GO:0006813 GO:0006814 GO:0010734 GO:0014704 GO:0016324 GO:0017022 GO:0017080 GO:0030315 GO:0032892 GO:0042383 GO:0044325 GO:0051117 GO:0051480 GO:0086004 GO:0086036 GO:1903278 GO:1903797 GO:2000649