GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID Gene Symbol Species Taxonomy ID No. of Glycosylation Sites ▼ GO Labels GO IDs
  • Tc00.1047053508461.30
353153
  • 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
  • 3-demethylubiquinone-9 3-O-methyltransferase activity
  • extrinsic component of mitochondrial inner membrane
  • hexaprenyldihydroxybenzoate methyltransferase activity
  • methylation
  • ubiquinone biosynthetic process
  • GO:0004395
  • GO:0006744
  • GO:0008425
  • GO:0008689
  • GO:0031314
  • GO:0032259
  • TRIUR3_22227
4572
  • ATP binding
  • RNA binding
  • RNA helicase activity
  • hydrolase activity
  • GO:0003723
  • GO:0003724
  • GO:0005524
  • GO:0016787
  • RPAIN
9606
  • PML body
  • cytoplasm
  • fibrillar center
  • metal ion binding
  • nucleoplasm
  • nucleus
  • protein import into nucleus
  • response to UV
  • GO:0001650
  • GO:0005634
  • GO:0005654
  • GO:0005737
  • GO:0006606
  • GO:0009411
  • GO:0016605
  • GO:0046872
  • Tc00.1047053510609.20
353153
  • CCT6B
9606
  • ATP binding
  • ATP hydrolysis activity
  • ATP-dependent protein folding chaperone
  • chaperonin-containing T-complex
  • cytosol
  • protein folding
  • protein folding chaperone
  • unfolded protein binding
  • GO:0005524
  • GO:0005829
  • GO:0005832
  • GO:0006457
  • GO:0016887
  • GO:0044183
  • GO:0051082
  • GO:0140662
  • TRIUR3_28421
4572
  • CC2D1A
9606
  • DNA-binding transcription factor activity, RNA polymerase II-specific
  • DNA-binding transcription repressor activity, RNA polymerase II-specific
  • RNA polymerase II cis-regulatory region sequence-specific DNA binding
  • cadherin binding
  • cytosol
  • extracellular exosome
  • fibrillar center
  • membrane
  • microtubule organizing center
  • negative regulation of snRNA transcription by RNA polymerase II
  • nucleus
  • plasma membrane
  • positive regulation of canonical NF-kappaB signal transduction
  • regulation of transcription by RNA polymerase II
  • GO:0000978
  • GO:0000981
  • GO:0001227
  • GO:0001650
  • GO:0005634
  • GO:0005815
  • GO:0005829
  • GO:0005886
  • GO:0006357
  • GO:0016020
  • GO:0043123
  • GO:0045296
  • GO:0070062
  • GO:1905381
  • ANKRD9
9606
  • Cul5-RING ubiquitin ligase complex
  • cytoplasmic vesicle
  • cytosol
  • intracellular copper ion homeostasis
  • proteasome-mediated ubiquitin-dependent protein catabolic process
  • protein ubiquitination
  • ubiquitin ligase-substrate adaptor activity
  • GO:0005829
  • GO:0006878
  • GO:0016567
  • GO:0031410
  • GO:0031466
  • GO:0043161
  • GO:1990756
  • TCDM_03880
1416333
  • Dbi
10090
  • fatty-acyl-CoA binding
  • GO:0000062
Displaying entries 120051 - 120060 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01