GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name	UniProt ID	Gene Symbol	Species	Taxonomy ID	GO Labels	GO IDs
Uncharacterized protein	V5BIE9	TCDM_07702	Trypanosoma cruzi Dm28c	1416333
Uncharacterized protein	V5BMS4	TCDM_02104	Trypanosoma cruzi Dm28c	1416333
Cleavage and polyadenylation specificity factor subunit 1	Q10570	CPSF1	Homo sapiens	9606	co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway enzyme binding mRNA 3'-UTR AU-rich region binding mRNA cleavage and polyadenylation specificity factor complex mRNA polyadenylation nucleoplasm nucleus	GO:0005634 GO:0005654 GO:0005847 GO:0006378 GO:0019899 GO:0035925 GO:0180012
Autophagy-related protein 9	Q3T8Y9	atg9	Triticum aestivum	4565	autophagy lipid transport phagophore assembly site membrane	GO:0006869 GO:0006914 GO:0034045
Secretory carrier-associated membrane protein 2	O15127	SCAMP2	Homo sapiens	9606	Golgi apparatus extracellular exosome intracellular membrane-bounded organelle membrane post-Golgi vesicle-mediated transport protein transport recycling endosome membrane trans-Golgi network membrane	GO:0005794 GO:0006892 GO:0015031 GO:0016020 GO:0032588 GO:0043231 GO:0055038 GO:0070062
Acid phosphatase, putative	Q4DDI3	Tc00.1047053510181.100	Trypanosoma cruzi strain CL Brener	353153
E3 ubiquitin-protein ligase UHRF1	Q8VDF2	Uhrf1	Mus musculus	10090	DNA repair cell cycle chromatin cis-regulatory region sequence-specific DNA binding euchromatin hemi-methylated DNA-binding heterochromatin heterochromatin formation histone H3 ubiquitin ligase activity histone binding identical protein binding methyl-CpG binding methylated histone binding negative regulation of gene expression via CpG island methylation negative regulation of transcription by RNA polymerase II nuclear matrix nucleic acid binding nucleoplasm nucleus positive regulation of protein metabolic process protein ubiquitination regulation of epithelial cell proliferation replication fork ubiquitin protein ligase activity ubiquitin-dependent protein catabolic process ubiquitin-protein transferase activity zinc ion binding	GO:0000122 GO:0000785 GO:0000791 GO:0000792 GO:0000987 GO:0003676 GO:0004842 GO:0005634 GO:0005654 GO:0005657 GO:0006281 GO:0006511 GO:0007049 GO:0008270 GO:0008327 GO:0016363 GO:0016567 GO:0031507 GO:0035064 GO:0042393 GO:0042802 GO:0044027 GO:0044729 GO:0050678 GO:0051247 GO:0061630 GO:0141055
SH2 domain-containing protein 7	A6NKC9	SH2D7	Homo sapiens	9606	cytoplasm	GO:0005737
Chromobox protein homolog 1	P83916	CBX1	Homo sapiens	9606	DNA binding DNA damage response chromatin chromatin binding chromatin organization chromocenter chromosome, centromeric region chromosome, telomeric region enzyme binding female pronucleus heterochromatin histone methyltransferase binding identical protein binding intracellular membrane-bounded organelle male pronucleus methylated histone binding molecular adaptor activity negative regulation of transcription by RNA polymerase II nuclear body nucleoplasm nucleus pericentric heterochromatin site of DNA damage spindle	GO:0000122 GO:0000775 GO:0000781 GO:0000785 GO:0000792 GO:0001939 GO:0001940 GO:0003677 GO:0003682 GO:0005634 GO:0005654 GO:0005721 GO:0005819 GO:0006325 GO:0006974 GO:0010369 GO:0016604 GO:0019899 GO:0035064 GO:0042802 GO:0043231 GO:0060090 GO:0090734 GO:1990226
Flagellum attachment zone protein 2	V5AZQ0	TCDM_05004	Trypanosoma cruzi Dm28c	1416333