GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name	UniProt ID	Gene Symbol	Species	Taxonomy ID	GO Labels	GO IDs
Negative elongation factor C/D	Q8IXH7	NELFCD	Homo sapiens	9606	NELF complex RNA binding membrane negative regulation of transcription elongation by RNA polymerase II nucleoplasm nucleus	GO:0003723 GO:0005634 GO:0005654 GO:0016020 GO:0032021 GO:0034244
Ribulose-phosphate 3-epimerase	Q96AT9	RPE	Homo sapiens	9606	D-ribulose-phosphate 3-epimerase activity carbohydrate metabolic process cytosol extracellular exosome identical protein binding metal ion binding pentose-phosphate shunt pentose-phosphate shunt, non-oxidative branch protein homodimerization activity	GO:0004750 GO:0005829 GO:0005975 GO:0006098 GO:0009052 GO:0042802 GO:0042803 GO:0046872 GO:0070062
Ubiquitin carboxyl-terminal hydrolase 38	Q8NB14	USP38	Homo sapiens	9606	cysteine-type deubiquitinase activity cytoplasm cytosol negative regulation of innate immune response negative regulation of proteasomal ubiquitin-dependent protein catabolic process nucleus protein deubiquitination protein sequestering activity ubiquitin-dependent protein catabolic process	GO:0004843 GO:0005634 GO:0005737 GO:0005829 GO:0006511 GO:0016579 GO:0032435 GO:0045824 GO:0140311
Uncharacterized protein	Q6RUK3	109N23.4	Triticum monococcum	4568
Adenylate kinase isoenzyme 6	Q9Y3D8	AK6	Homo sapiens	9606	ATP binding ATP hydrolysis activity Cajal body adenylate kinase activity centrosome cytoplasm membrane nuclear speck nucleobase-containing small molecule interconversion nucleoplasm nucleoside monophosphate kinase activity nucleus phosphorylation	GO:0004017 GO:0005524 GO:0005634 GO:0005654 GO:0005737 GO:0005813 GO:0015030 GO:0015949 GO:0016020 GO:0016310 GO:0016607 GO:0016887 GO:0050145
Transcriptional repressor CTCF	P49711	CTCF	Homo sapiens	9606	DNA methylation DNA-binding transcription factor activity DNA-binding transcription repressor activity, RNA polymerase II-specific RNA polymerase II cis-regulatory region sequence-specific DNA binding chromatin insulator sequence binding chromatin looping chromosome segregation chromosome, centromeric region condensed chromosome epigenetic regulation of gene expression genomic imprinting male germ cell nucleus negative regulation of DNA-templated transcription negative regulation of cell population proliferation negative regulation of gene expression via CpG island methylation negative regulation of transcription by RNA polymerase II nucleolus nucleoplasm nucleus obsolete regulation of gene expression by genomic imprinting positive regulation of DNA-templated transcription positive regulation of gene expression protein localization to chromosome, centromeric region regulation of centromeric sister chromatid cohesion sequence-specific DNA binding transcription cis-regulatory region binding transcription coregulator binding zinc ion binding	GO:0000122 GO:0000775 GO:0000793 GO:0000976 GO:0000978 GO:0001221 GO:0001227 GO:0001673 GO:0003700 GO:0005634 GO:0005654 GO:0005730 GO:0006306 GO:0006349 GO:0007059 GO:0008270 GO:0008285 GO:0010628 GO:0040029 GO:0043035 GO:0043565 GO:0044027 GO:0045892 GO:0045893 GO:0070602 GO:0071459 GO:0071514 GO:0140588
40S ribosomal protein S4	O62594	RibpS4	Trypanosoma cruzi	5693	rRNA binding ribonucleoprotein complex ribosome structural constituent of ribosome translation	GO:0003735 GO:0005840 GO:0006412 GO:0019843 GO:1990904
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial	Q4DW49	Tc00.1047053507681.20	Trypanosoma cruzi strain CL Brener	353153	ATP binding magnesium ion binding mitochondrion succinate-CoA ligase (ADP-forming) activity tricarboxylic acid cycle	GO:0000287 GO:0004775 GO:0005524 GO:0005739 GO:0006099
Putative DENN domain-containing protein 10 B	Q6NSW5	DENND10P1	Homo sapiens	9606	guanyl-nucleotide exchange factor activity late endosome protein transport regulation of early endosome to late endosome transport small GTPase binding	GO:0005085 GO:0005770 GO:0015031 GO:0031267 GO:2000641
Mitochondrial amidoxime-reducing component 1	Q9CW42	Mtarc1	Mus musculus	10090	cellular detoxification of nitrogen compound mitochondrial inner membrane mitochondrial outer membrane mitochondrion molybdenum ion binding molybdopterin cofactor binding nitrate metabolic process nitrate reductase activity nitric oxide biosynthetic process nitric-oxide synthase complex nitrite reductase activity oxidoreductase activity, acting on other nitrogenous compounds as donors pyridoxal phosphate binding	GO:0005739 GO:0005741 GO:0005743 GO:0006809 GO:0008940 GO:0016661 GO:0030151 GO:0030170 GO:0042126 GO:0043546 GO:0070458 GO:0098809 GO:1903958