GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name	UniProt ID	Gene Symbol	Species	Taxonomy ID	GO Labels	GO IDs
Isocitrate dehydrogenase [NADP], mitochondrial	P48735	IDH2	Homo sapiens	9606	2-oxoglutarate metabolic process NAD binding NADP metabolic process carbohydrate metabolic process cytosol extracellular exosome glyoxylate cycle isocitrate dehydrogenase (NADP+) activity isocitrate metabolic process magnesium ion binding mitochondrial matrix mitochondrion peroxisome tricarboxylic acid cycle	GO:0000287 GO:0004450 GO:0005739 GO:0005759 GO:0005777 GO:0005829 GO:0005975 GO:0006097 GO:0006099 GO:0006102 GO:0006103 GO:0006739 GO:0051287 GO:0070062
Kinesin-like protein KIFC1	Q9BW19	KIFC1	Homo sapiens	9606	ATP binding ATP hydrolysis activity cell division early endosome kinesin complex membrane microtubule microtubule binding microtubule motor activity microtubule organizing center microtubule-based movement mitotic metaphase chromosome alignment mitotic sister chromatid segregation mitotic spindle mitotic spindle assembly nucleus	GO:0000070 GO:0003777 GO:0005524 GO:0005634 GO:0005769 GO:0005815 GO:0005871 GO:0005874 GO:0007018 GO:0007080 GO:0008017 GO:0016020 GO:0016887 GO:0051301 GO:0072686 GO:0090307
L-lactate dehydrogenase	A0A0F7UY31	BN1205_023290	Toxoplasma gondii VEG	432359	carboxylic acid metabolic process oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0016616 GO:0019752
Cyclin-dependent kinase 1	P06493	CDK1	Homo sapiens	9606	ATP binding DNA repair DNA replication ERK1 and ERK2 cascade G1/S transition of mitotic cell cycle G2/M transition of mitotic cell cycle Golgi disassembly Hsp70 protein binding RNA polymerase II CTD heptapeptide repeat kinase activity animal organ regeneration apoptotic process cell division cell migration cellular response to hydrogen peroxide cellular response to organic cyclic compound centrosome centrosome cycle chromatin binding chromosome condensation chromosome, telomeric region cyclin A2-CDK1 complex cyclin B1-CDK1 complex cyclin binding cyclin-dependent protein kinase activity cyclin-dependent protein kinase holoenzyme complex cyclin-dependent protein serine/threonine kinase activity cytoplasm cytosol endoplasmic reticulum membrane epithelial cell differentiation extracellular exosome fibroblast proliferation histone kinase activity kinase activity membrane microtubule cytoskeleton organization microtubule cytoskeleton organization involved in mitosis midbody mitochondrial matrix mitochondrion mitotic G2 DNA damage checkpoint signaling mitotic spindle negative regulation of apoptotic process negative regulation of gene expression nucleoplasm nucleus peptidyl-serine phosphorylation peptidyl-threonine phosphorylation positive regulation of DNA replication positive regulation of G2/M transition of mitotic cell cycle positive regulation of cardiac muscle cell proliferation positive regulation of gene expression positive regulation of mitochondrial ATP synthesis coupled electron transport positive regulation of mitotic sister chromatid segregation positive regulation of protein import into nucleus positive regulation of protein localization to nucleus pronuclear fusion protein kinase activity protein localization to kinetochore protein phosphorylation protein serine kinase activity protein serine/threonine kinase activity protein-containing complex assembly regulation of Schwann cell differentiation regulation of circadian rhythm regulation of embryonic development response to activity response to amine response to axon injury response to cadmium ion response to copper ion response to ethanol response to toxic substance response to xenobiotic stimulus rhythmic process spindle microtubule ventricular cardiac muscle cell development virus receptor activity	GO:0000082 GO:0000086 GO:0000226 GO:0000307 GO:0000781 GO:0001618 GO:0003682 GO:0004672 GO:0004674 GO:0004693 GO:0005524 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0005759 GO:0005789 GO:0005813 GO:0005829 GO:0005876 GO:0006260 GO:0006281 GO:0006468 GO:0006915 GO:0007095 GO:0007098 GO:0007344 GO:0008353 GO:0009410 GO:0009636 GO:0010628 GO:0010629 GO:0010971 GO:0014038 GO:0014075 GO:0014823 GO:0016020 GO:0016301 GO:0016477 GO:0018105 GO:0018107 GO:0030261 GO:0030332 GO:0030496 GO:0030544 GO:0030855 GO:0031100 GO:0034501 GO:0035173 GO:0042307 GO:0042752 GO:0043066 GO:0045471 GO:0045740 GO:0045995 GO:0046686 GO:0046688 GO:0048144 GO:0048511 GO:0048678 GO:0051301 GO:0055015 GO:0060045 GO:0062033 GO:0065003 GO:0070062 GO:0070301 GO:0070371 GO:0071407 GO:0072686 GO:0090166 GO:0097122 GO:0097125 GO:0097472 GO:0106310 GO:1900182 GO:1902850 GO:1905448
Dumpy, isoform AA	M9PB32	dpy	Drosophila melanogaster	7227	apposition of dorsal and ventral imaginal disc-derived wing surfaces calcium ion binding chitin-based cuticle attachment to epithelium chitin-based embryonic cuticle biosynthetic process extracellular matrix extracellular matrix structural constituent membrane nucleus open tracheal system development regulation of imaginal disc-derived wing size zinc ion binding	GO:0005201 GO:0005509 GO:0005634 GO:0007424 GO:0007475 GO:0008270 GO:0008362 GO:0016020 GO:0031012 GO:0040005 GO:0044719
Leucine-rich repeat protein	V5DBQ6	TCDM_06902	Trypanosoma cruzi Dm28c	1416333	cilium	GO:0005929
Serine/threonine-protein phosphatase 4 regulatory subunit 4	Q6NUP7	PPP4R4	Homo sapiens	9606	blastocyst hatching cytoplasm cytosol negative regulation of phosphoprotein phosphatase activity protein phosphatase regulator activity protein serine/threonine phosphatase complex regulation of protein serine/threonine phosphatase activity	GO:0001835 GO:0005737 GO:0005829 GO:0008287 GO:0019888 GO:0032515 GO:0080163
AU RNA binding protein/enoyl-coenzyme A hydratase	A0A0R4J023	Auh	Mus musculus	10090	enoyl-CoA hydratase activity mRNA 3'-UTR binding	GO:0003730 GO:0004300
Atlastin-1	Q8BH66	Atl1	Mus musculus	10090	GTP binding GTPase activity Golgi apparatus Golgi cis cisterna Golgi membrane axon axonogenesis cytoplasm endoplasmic reticulum endoplasmic reticulum membrane endoplasmic reticulum organization endoplasmic reticulum tubular network endoplasmic reticulum tubular network membrane endoplasmic reticulum tubular network membrane organization identical protein binding membrane protein homooligomerization	GO:0000137 GO:0000139 GO:0003924 GO:0005525 GO:0005737 GO:0005783 GO:0005789 GO:0005794 GO:0007029 GO:0007409 GO:0016020 GO:0030424 GO:0042802 GO:0051260 GO:0071782 GO:0098826 GO:1990809
SAC3/GANP/Nin1/mts3/eIF-3 p25 family	A0A178V7S6	SAC3B	Arabidopsis thaliana	3702