GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID Gene Symbol Species Taxonomy ID No. of Glycosylation Sites GO Labels GO IDs
  • FICD
109925
1
  • ATP binding
  • GO:0005524
  • Qsox1
7227
1
  • extracellular space
  • flavin-dependent sulfhydryl oxidase activity
  • membrane
  • protein disulfide isomerase activity
  • protein folding
  • protein folding in endoplasmic reticulum
  • GO:0003756
  • GO:0005615
  • GO:0006457
  • GO:0016020
  • GO:0016971
  • GO:0034975
  • CDH13
9913
9
  • adherens junction
  • adherens junction organization
  • cadherin binding
  • calcium ion binding
  • calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
  • catenin complex
  • cell morphogenesis
  • cell-cell adhesion mediated by cadherin
  • cell-cell junction assembly
  • homophilic cell adhesion via plasma membrane adhesion molecules
  • side of membrane
  • sprouting angiogenesis
  • GO:0000902
  • GO:0002040
  • GO:0005509
  • GO:0005912
  • GO:0007043
  • GO:0007156
  • GO:0016339
  • GO:0016342
  • GO:0034332
  • GO:0044331
  • GO:0045296
  • GO:0098552
  • NSP4
31563
1
  • extracellular region
  • host caveola
  • host cell rough endoplasmic reticulum membrane
  • induction by virus of host autophagy
  • membrane
  • metal ion binding
  • monoatomic ion channel activity
  • protein complex oligomerization
  • toxin activity
  • virus-mediated pore formation in host cell membrane
  • GO:0005216
  • GO:0005576
  • GO:0016020
  • GO:0039520
  • GO:0039707
  • GO:0044155
  • GO:0044169
  • GO:0046872
  • GO:0051259
  • GO:0090729
  • PPFIA3
9606
1
  • acrosomal vesicle
  • cytosol
  • epididymosome
  • glutamatergic synapse
  • neurotransmitter secretion
  • presynaptic active zone
  • presynaptic active zone cytoplasmic component
  • regulation of short-term neuronal synaptic plasticity
  • synapse organization
  • synaptic vesicle docking
  • GO:0001669
  • GO:0005829
  • GO:0007269
  • GO:0016081
  • GO:0048172
  • GO:0048786
  • GO:0050808
  • GO:0098831
  • GO:0098875
  • GO:0098978
  • LTA
9598
2
  • cytokine activity
  • defense response to Gram-positive bacterium
  • extracellular space
  • humoral immune response
  • lymph node development
  • membrane
  • positive regulation of chronic inflammatory response to antigenic stimulus
  • positive regulation of humoral immune response mediated by circulating immunoglobulin
  • positive regulation of type II interferon production
  • tumor necrosis factor receptor binding
  • GO:0002876
  • GO:0002925
  • GO:0005125
  • GO:0005164
  • GO:0005615
  • GO:0006959
  • GO:0016020
  • GO:0032729
  • GO:0048535
  • GO:0050830
  • M2
1731875
1
  • host cell plasma membrane
  • membrane
  • monoatomic ion channel activity
  • protein complex oligomerization
  • proton transmembrane transporter activity
  • suppression by virus of host autophagy
  • virion membrane
  • virus-mediated pore formation in host cell membrane
  • GO:0005216
  • GO:0015078
  • GO:0016020
  • GO:0020002
  • GO:0039521
  • GO:0039707
  • GO:0051259
  • GO:0055036
  • M2
390188
1
  • host cell plasma membrane
  • membrane
  • monoatomic ion channel activity
  • protein complex oligomerization
  • proton transmembrane transporter activity
  • suppression by virus of host autophagy
  • virion membrane
  • virus-mediated pore formation in host cell membrane
  • GO:0005216
  • GO:0015078
  • GO:0016020
  • GO:0020002
  • GO:0039521
  • GO:0039707
  • GO:0051259
  • GO:0055036
  • PAM
452646
1
  • L-ascorbic acid binding
  • copper ion binding
  • lyase activity
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen
  • peptide metabolic process
  • transport vesicle membrane
  • GO:0005507
  • GO:0006518
  • GO:0016715
  • GO:0016829
  • GO:0030658
  • GO:0031418
  • ugt-39
6239
1
  • UDP-glycosyltransferase activity
  • glucuronosyltransferase activity
  • membrane
  • GO:0008194
  • GO:0015020
  • GO:0016020
Displaying entries 120141 - 120150 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01