GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID Gene Symbol ▲ Species Taxonomy ID No. of Glycosylation Sites GO Labels GO IDs
  • yellow-f2
7227
2
  • developmental pigmentation
  • dopachrome isomerase activity
  • dopaminechrome tautomerase activity
  • extracellular region
  • indole-containing compound biosynthetic process
  • melanin biosynthetic process from tyrosine
  • GO:0004167
  • GO:0005576
  • GO:0006583
  • GO:0042435
  • GO:0048066
  • GO:0106417
  • yipf1
44689
3
  • Golgi apparatus
  • late endosome membrane
  • small GTPase binding
  • vesicle-mediated transport
  • GO:0005794
  • GO:0016192
  • GO:0031267
  • GO:0031902
  • yipf3
8355
1
  • Golgi apparatus
  • cell differentiation
  • plasma membrane
  • GO:0005794
  • GO:0005886
  • GO:0030154
  • yipf3
7955
1
  • Golgi apparatus
  • cell differentiation
  • plasma membrane
  • GO:0005794
  • GO:0005886
  • GO:0030154
  • yl
7227
13
  • calcium ion binding
  • coated vesicle
  • cytoplasmic vesicle
  • oogenesis
  • plasma membrane
  • vitellogenin receptor activity
  • GO:0005509
  • GO:0005886
  • GO:0008196
  • GO:0030135
  • GO:0031410
  • GO:0048477
  • yos-9
367110
1
  • carbohydrate binding
  • endoplasmic reticulum lumen
  • endoplasmic reticulum membrane
  • endoplasmic reticulum unfolded protein response
  • retrograde protein transport, ER to cytosol
  • ubiquitin-dependent ERAD pathway
  • GO:0005788
  • GO:0005789
  • GO:0030246
  • GO:0030433
  • GO:0030968
  • GO:0030970
  • yos9
284812
4
  • carbohydrate binding
  • endoplasmic reticulum lumen
  • endoplasmic reticulum membrane
  • endoplasmic reticulum unfolded protein response
  • retrograde protein transport, ER to cytosol
  • ubiquitin-dependent ERAD pathway
  • GO:0005788
  • GO:0005789
  • GO:0030246
  • GO:0030433
  • GO:0030968
  • GO:0030970
  • yos9
227321
1
  • carbohydrate binding
  • endoplasmic reticulum lumen
  • endoplasmic reticulum membrane
  • endoplasmic reticulum unfolded protein response
  • retrograde protein transport, ER to cytosol
  • ubiquitin-dependent ERAD pathway
  • GO:0005788
  • GO:0005789
  • GO:0030246
  • GO:0030433
  • GO:0030968
  • GO:0030970
  • yps1
284812
10
  • aspartic-type endopeptidase activity
  • endoplasmic reticulum membrane
  • external side of plasma membrane
  • extracellular region
  • fungal-type cell wall
  • proteolysis
  • GO:0004190
  • GO:0005576
  • GO:0005789
  • GO:0006508
  • GO:0009277
  • GO:0009897
  • zfr-1
6239
1
  • axon guidance
  • double-stranded RNA binding
  • mRNA splicing, via spliceosome
  • neuron differentiation
  • single-stranded RNA binding
  • spliceosomal complex
  • zinc ion binding
  • GO:0000398
  • GO:0003725
  • GO:0003727
  • GO:0005681
  • GO:0007411
  • GO:0008270
  • GO:0030182
Displaying entries 120171 - 120180 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01