GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name	UniProt ID	Gene Symbol	Species	Taxonomy ID	GO Labels	GO IDs
Mediator of RNA polymerase II transcription subunit 12-like protein	Q86YW9	MED12L	Homo sapiens	9606	beta-catenin binding mediator complex positive regulation of transcription by RNA polymerase II transcription coactivator activity	GO:0003713 GO:0008013 GO:0016592 GO:0045944
Small nuclear ribonucleoprotein polypeptide A'	G5E883	Snrpa1	Mus musculus	10090	U2 snRNA binding mRNA splicing, via spliceosome	GO:0000398 GO:0030620
G10 protein	V5AWF3	TCDM_06572	Trypanosoma cruzi Dm28c	1416333	nucleus	GO:0005634
Heat shock 70 kDa protein 6	P17066	HSPA6	Homo sapiens	9606	ATP binding ATP hydrolysis activity ATP-dependent protein folding chaperone blood microparticle cellular response to heat centriole chaperone cofactor-dependent protein refolding cytoplasm cytosol enzyme binding extracellular exosome extracellular region ficolin-1-rich granule lumen heat shock protein binding nucleus protein folding chaperone protein refolding response to unfolded protein secretory granule lumen ubiquitin protein ligase binding unfolded protein binding	GO:0005524 GO:0005576 GO:0005634 GO:0005737 GO:0005814 GO:0005829 GO:0006986 GO:0016887 GO:0019899 GO:0031072 GO:0031625 GO:0034605 GO:0034774 GO:0042026 GO:0044183 GO:0051082 GO:0051085 GO:0070062 GO:0072562 GO:0140662 GO:1904813
Cytoskeleton associated protein 5	F1M949	Ckap5	Rattus norvegicus	10116	central nervous system myelin formation centrosome centrosome cycle cytoplasm cytoplasmic translation dendrite dendritic spine maintenance establishment or maintenance of microtubule cytoskeleton polarity excitatory postsynaptic potential habituation kinetochore locomotory behavior long-term synaptic potentiation mRNA localization resulting in post-transcriptional regulation of gene expression microtubule binding microtubule plus end polymerase microtubule plus-end binding microtubule polymerization neuronal ribonucleoprotein granule perikaryon positive regulation of endocytosis positive regulation of microtubule nucleation postsynapse protein-RNA complex assembly protein-containing complex ribonucleoprotein complex binding spindle organization spindle pole visual learning	GO:0000776 GO:0000922 GO:0002181 GO:0005737 GO:0005813 GO:0007051 GO:0007098 GO:0007626 GO:0008017 GO:0008542 GO:0010609 GO:0022618 GO:0030425 GO:0030951 GO:0032289 GO:0032991 GO:0043021 GO:0043204 GO:0045807 GO:0046785 GO:0046959 GO:0051010 GO:0060079 GO:0060291 GO:0061863 GO:0071598 GO:0090063 GO:0097062 GO:0098794
Guanylate-binding protein 5	Q96PP8	GBP5	Homo sapiens	9606	GTP binding GTPase activity Golgi apparatus Golgi membrane activation of innate immune response cellular response to lipopolysaccharide cellular response to type II interferon cytolysis in another organism cytoplasm cytoplasmic vesicle cytoplasmic vesicle membrane defense response to bacterium defense response to virus endopeptidase inhibitor activity identical protein binding inflammatory response membrane molecular function inhibitor activity perinuclear region of cytoplasm positive regulation of AIM2 inflammasome complex assembly positive regulation of NLRP3 inflammasome complex assembly positive regulation of cytokine production involved in inflammatory response positive regulation of innate immune response positive regulation of interleukin-1 beta production positive regulation of interleukin-18 production positive regulation of pyroptosis protein homodimerization activity protein homotetramerization protein localization to Golgi apparatus protein targeting side of membrane symbiont cell surface	GO:0000139 GO:0002218 GO:0003924 GO:0004866 GO:0005525 GO:0005737 GO:0005794 GO:0006605 GO:0006954 GO:0016020 GO:0030659 GO:0031410 GO:0032731 GO:0032741 GO:0034067 GO:0042742 GO:0042802 GO:0042803 GO:0045089 GO:0048471 GO:0051289 GO:0051607 GO:0051715 GO:0071222 GO:0071346 GO:0098552 GO:0106139 GO:0140639 GO:0140678 GO:0140973 GO:1900017 GO:1900227
NTF2-related export protein 2	Q9NPJ8	NXT2	Homo sapiens	9606	cytosol mRNA export from nucleus nuclear RNA export factor complex nuclear pore central transport channel nucleoplasm nucleus perinuclear region of cytoplasm poly(A)+ mRNA export from nucleus protein transport	GO:0005634 GO:0005654 GO:0005829 GO:0006406 GO:0015031 GO:0016973 GO:0042272 GO:0044613 GO:0048471
BMS1 homolog, ribosome assembly protein (Yeast)	Q6PGF5	Bms1	Mus musculus	10090	90S preribosome GTP binding GTPase activity U3 snoRNA binding chromosome endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) nucleolus nucleoplasm ribosomal small subunit biogenesis small-subunit processome	GO:0000462 GO:0000479 GO:0003924 GO:0005525 GO:0005654 GO:0005694 GO:0005730 GO:0030686 GO:0032040 GO:0034511 GO:0042274