GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID Gene Symbol Species Taxonomy ID ▲ No. of Glycosylation Sites GO Labels GO IDs
  • RNASE1
10029
1
  • extracellular region
  • lyase activity
  • nucleic acid binding
  • ribonuclease A activity
  • GO:0003676
  • GO:0004522
  • GO:0005576
  • GO:0016829
  • P2rx4
10029
1
  • ATP binding
  • extracellularly ATP-gated monoatomic cation channel activity
  • plasma membrane
  • postsynapse
  • purinergic nucleotide receptor activity
  • response to ATP
  • GO:0001614
  • GO:0004931
  • GO:0005524
  • GO:0005886
  • GO:0033198
  • GO:0098794
  • Rho
10029
2
  • G protein-coupled receptor activity
  • Golgi apparatus
  • absorption of visible light
  • adaptation of rhodopsin mediated signaling
  • cell-cell junction
  • detection of temperature stimulus involved in thermoception
  • gene expression
  • metal ion binding
  • photoreceptor activity
  • photoreceptor cell maintenance
  • photoreceptor disc membrane
  • photoreceptor inner segment membrane
  • photoreceptor outer segment membrane
  • rod bipolar cell differentiation
  • rod photoreceptor outer segment
  • sperm head plasma membrane
  • sperm midpiece
  • thermotaxis
  • visual perception
  • GO:0004930
  • GO:0005794
  • GO:0005911
  • GO:0007601
  • GO:0009881
  • GO:0010467
  • GO:0016038
  • GO:0016062
  • GO:0042622
  • GO:0043052
  • GO:0045494
  • GO:0046872
  • GO:0050960
  • GO:0060342
  • GO:0097225
  • GO:0097381
  • GO:0120200
  • GO:1904389
  • GO:1990913
  • H671_xg20583
10029
1
  • metal ion binding
  • regulation of monoatomic ion transmembrane transport
  • voltage-gated calcium channel activity
  • voltage-gated calcium channel complex
  • GO:0005245
  • GO:0005891
  • GO:0034765
  • GO:0046872
  • SDC1
10029
6
  • canonical Wnt signaling pathway
  • cargo receptor activity
  • external side of plasma membrane
  • extracellular region
  • identical protein binding
  • myoblast development
  • positive regulation of exosomal secretion
  • positive regulation of extracellular exosome assembly
  • positive regulation of syncytium formation by plasma membrane fusion
  • receptor-mediated endocytosis
  • striated muscle cell development
  • GO:0005576
  • GO:0006898
  • GO:0009897
  • GO:0038024
  • GO:0042802
  • GO:0048627
  • GO:0055002
  • GO:0060070
  • GO:0060143
  • GO:1903543
  • GO:1903553
  • Kcnk16
10029
1
  • membrane
  • potassium channel activity
  • GO:0005267
  • GO:0016020
  • FUT9
10029
3
  • 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity
  • Golgi apparatus
  • Golgi membrane
  • N-glycan fucosylation
  • fucosylation
  • glycosphingolipid biosynthetic process
  • neuron differentiation
  • oligosaccharide biosynthetic process
  • polysaccharide biosynthetic process
  • positive regulation of neuron projection development
  • protein N-linked glycosylation
  • protein O-linked glycosylation
  • regulation of leukocyte cell-cell adhesion
  • regulation of leukocyte tethering or rolling
  • trans-Golgi network
  • trans-Golgi network membrane
  • GO:0000139
  • GO:0000271
  • GO:0005794
  • GO:0005802
  • GO:0006487
  • GO:0006493
  • GO:0006688
  • GO:0009312
  • GO:0010976
  • GO:0017083
  • GO:0030182
  • GO:0032588
  • GO:0036065
  • GO:0036071
  • GO:1903037
  • GO:1903236
  • Cacna1s
10029
2
  • metal ion binding
  • regulation of monoatomic ion transmembrane transport
  • voltage-gated calcium channel activity
  • voltage-gated calcium channel complex
  • GO:0005245
  • GO:0005891
  • GO:0034765
  • GO:0046872
  • P2rx3
10029
1
  • ATP binding
  • extracellularly ATP-gated monoatomic cation channel activity
  • plasma membrane
  • postsynapse
  • purinergic nucleotide receptor activity
  • response to ATP
  • GO:0001614
  • GO:0004931
  • GO:0005524
  • GO:0005886
  • GO:0033198
  • GO:0098794
  • CDH2
10029
3
  • adherens junction
  • calcium ion binding
  • cell junction
  • cell surface
  • cell-cell adhesion
  • cell-cell adhesion mediated by cadherin
  • desmosome
  • glial cell differentiation
  • homophilic cell adhesion via plasma membrane adhesion molecules
  • intercalated disc
  • neuronal stem cell population maintenance
  • plasma membrane
  • sarcolemma
  • GO:0005509
  • GO:0005886
  • GO:0005912
  • GO:0007156
  • GO:0009986
  • GO:0010001
  • GO:0014704
  • GO:0030054
  • GO:0030057
  • GO:0042383
  • GO:0044331
  • GO:0097150
  • GO:0098609
Displaying entries 211 - 220 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01