GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name ▲ UniProt ID Gene Symbol Species Taxonomy ID No. of Glycosylation Sites GO Labels GO IDs
  • TCDM_04186
1416333
  • 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
  • GO:0003863
  • Bckdha
10090
  • 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
  • branched-chain amino acid catabolic process
  • metal ion binding
  • mitochondrial alpha-ketoglutarate dehydrogenase complex
  • mitochondrion
  • protein-containing complex binding
  • GO:0003863
  • GO:0005739
  • GO:0005947
  • GO:0009083
  • GO:0044877
  • GO:0046872
  • Bckdha
10116
2
  • 2-oxoisovalerate dehydrogenase (acylating) activity
  • 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
  • branched-chain amino acid catabolic process
  • metal ion binding
  • mitochondrial alpha-ketoglutarate dehydrogenase complex
  • protein-containing complex binding
  • response to cAMP
  • response to glucocorticoid
  • response to nutrient
  • GO:0003863
  • GO:0005947
  • GO:0007584
  • GO:0009083
  • GO:0044877
  • GO:0046872
  • GO:0047101
  • GO:0051384
  • GO:0051591
  • Bckdhb
10090
  • 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
  • amino acid catabolic process
  • branched-chain amino acid catabolic process
  • lipid metabolic process
  • metal ion binding
  • mitochondrial alpha-ketoglutarate dehydrogenase complex
  • mitochondrial inner membrane
  • mitochondrion
  • nucleolus
  • nucleoplasm
  • protein-containing complex binding
  • response to cAMP
  • response to glucocorticoid
  • response to nutrient
  • GO:0003863
  • GO:0005654
  • GO:0005730
  • GO:0005739
  • GO:0005743
  • GO:0005947
  • GO:0006629
  • GO:0007584
  • GO:0009063
  • GO:0009083
  • GO:0044877
  • GO:0046872
  • GO:0051384
  • GO:0051591
  • BCKDHB
9606
  • 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
  • branched-chain amino acid catabolic process
  • lipid metabolic process
  • mitochondrial alpha-ketoglutarate dehydrogenase complex
  • mitochondrial matrix
  • mitochondrion
  • nucleolus
  • nucleoplasm
  • protein-containing complex binding
  • response to cAMP
  • response to glucocorticoid
  • response to nutrient
  • GO:0003863
  • GO:0005654
  • GO:0005730
  • GO:0005739
  • GO:0005759
  • GO:0005947
  • GO:0006629
  • GO:0007584
  • GO:0009083
  • GO:0044877
  • GO:0051384
  • GO:0051591
  • PXYLP1
9606
2
  • Golgi apparatus
  • Golgi membrane
  • chondroitin sulfate proteoglycan biosynthetic process
  • dephosphorylation
  • glycosaminoglycan biosynthetic process
  • phosphatase activity
  • positive regulation of heparan sulfate proteoglycan biosynthetic process
  • GO:0000139
  • GO:0005794
  • GO:0006024
  • GO:0010909
  • GO:0016311
  • GO:0016791
  • GO:0050650
  • pxylp1
8364
3
  • Golgi apparatus
  • Golgi membrane
  • chondroitin sulfate proteoglycan biosynthetic process
  • glycosaminoglycan biosynthetic process
  • phosphatase activity
  • positive regulation of heparan sulfate proteoglycan biosynthetic process
  • GO:0000139
  • GO:0005794
  • GO:0006024
  • GO:0010909
  • GO:0016791
  • GO:0050650
  • Pxylp1
10116
3
  • Golgi apparatus
  • Golgi membrane
  • chondroitin sulfate proteoglycan biosynthetic process
  • dephosphorylation
  • glycosaminoglycan biosynthetic process
  • phosphatase activity
  • positive regulation of heparan sulfate proteoglycan biosynthetic process
  • GO:0000139
  • GO:0005794
  • GO:0006024
  • GO:0010909
  • GO:0016311
  • GO:0016791
  • GO:0050650
  • pxylp1
7955
3
  • Golgi apparatus
  • Golgi membrane
  • chondroitin sulfate proteoglycan biosynthetic process
  • dephosphorylation
  • glycosaminoglycan biosynthetic process
  • phosphatase activity
  • positive regulation of heparan sulfate proteoglycan biosynthetic process
  • GO:0000139
  • GO:0005794
  • GO:0006024
  • GO:0010909
  • GO:0016311
  • GO:0016791
  • GO:0050650
  • Pxylp1
10090
3
  • Golgi apparatus
  • Golgi membrane
  • chondroitin sulfate proteoglycan biosynthetic process
  • dephosphorylation
  • glycosaminoglycan biosynthetic process
  • phosphatase activity
  • positive regulation of heparan sulfate proteoglycan biosynthetic process
  • GO:0000139
  • GO:0005794
  • GO:0006024
  • GO:0010909
  • GO:0016311
  • GO:0016791
  • GO:0050650
Displaying entries 221 - 230 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01