GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID Gene Symbol Species Taxonomy ID No. of Glycosylation Sites GO Labels GO IDs
  • Nog
45807
1
  • cartilage development
  • extracellular region
  • negative regulation of BMP signaling pathway
  • negative regulation of cell differentiation
  • GO:0005576
  • GO:0030514
  • GO:0045596
  • GO:0051216
  • RET
9595
1
  • ATP binding
  • axon
  • calcium ion binding
  • cellular response to retinoic acid
  • endosome membrane
  • glial cell-derived neurotrophic factor receptor signaling pathway
  • homophilic cell adhesion via plasma membrane adhesion molecules
  • membrane protein proteolysis
  • membrane raft
  • neuron cell-cell adhesion
  • phosphorylation
  • plasma membrane protein complex
  • positive regulation of MAPK cascade
  • positive regulation of cell adhesion mediated by integrin
  • positive regulation of cell migration
  • positive regulation of neuron projection development
  • positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
  • receptor complex
  • transmembrane receptor protein tyrosine kinase activity
  • transmembrane receptor protein tyrosine kinase signaling pathway
  • GO:0004714
  • GO:0005509
  • GO:0005524
  • GO:0007156
  • GO:0007158
  • GO:0007169
  • GO:0010008
  • GO:0010976
  • GO:0016310
  • GO:0030335
  • GO:0030424
  • GO:0033619
  • GO:0033630
  • GO:0035860
  • GO:0043235
  • GO:0043410
  • GO:0045121
  • GO:0051897
  • GO:0071300
  • GO:0098797
  • TGVEG_246178
432359
  • membrane
  • GO:0016020
  • M2
11320
1
  • host cell plasma membrane
  • membrane
  • monoatomic ion channel activity
  • protein complex oligomerization
  • proton transmembrane transporter activity
  • suppression by virus of host autophagy
  • virion membrane
  • virus-mediated pore formation in host cell membrane
  • GO:0005216
  • GO:0015078
  • GO:0016020
  • GO:0020002
  • GO:0039521
  • GO:0039707
  • GO:0051259
  • GO:0055036
  • Cd44
10090
1
  • cell adhesion
  • hyaluronic acid binding
  • microvillus
  • plasma membrane
  • GO:0005540
  • GO:0005886
  • GO:0005902
  • GO:0007155
  • RHO
40230
2
  • G protein-coupled receptor activity
  • membrane
  • metal ion binding
  • photoreceptor activity
  • phototransduction
  • visual perception
  • GO:0004930
  • GO:0007601
  • GO:0007602
  • GO:0009881
  • GO:0016020
  • GO:0046872
  • B456_001G196500
29730
1
  • Golgi apparatus
  • UDP-L-arabinose metabolic process
  • UDP-arabinopyranose mutase activity
  • cell wall organization
  • cytosol
  • plant-type cell wall biogenesis
  • GO:0005794
  • GO:0005829
  • GO:0009832
  • GO:0033356
  • GO:0052691
  • GO:0071555
  • SYN2
9606
2
  • ATP binding
  • SNARE complex
  • Schaffer collateral - CA1 synapse
  • calcium-ion regulated exocytosis
  • chemical synaptic transmission
  • glutamatergic synapse
  • identical protein binding
  • neurotransmitter secretion
  • plasma membrane
  • postsynaptic density
  • synapse
  • synaptic vesicle clustering
  • synaptic vesicle membrane
  • GO:0005524
  • GO:0005886
  • GO:0007268
  • GO:0007269
  • GO:0014069
  • GO:0017156
  • GO:0030672
  • GO:0031201
  • GO:0042802
  • GO:0045202
  • GO:0097091
  • GO:0098685
  • GO:0098978
  • Adamts5
43316
1
  • collagen-containing extracellular matrix
  • extracellular matrix organization
  • extracellular region
  • metalloendopeptidase activity
  • proteolysis
  • zinc ion binding
  • GO:0004222
  • GO:0005576
  • GO:0006508
  • GO:0008270
  • GO:0030198
  • GO:0062023
  • FICD
9031
1
  • ATP binding
  • membrane
  • nucleotidyltransferase activity
  • GO:0005524
  • GO:0016020
  • GO:0016779
Displaying entries 231 - 240 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01