GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name	UniProt ID	Gene Symbol	Species	Taxonomy ID ▼	No. of Glycosylation Sites	GO Labels	GO IDs
Rhodopsin	Q4RXE1	GSTENG00027450001	Tetraodon nigroviridis	99883	2	G protein-coupled receptor activity membrane metal ion binding photoreceptor activity photoreceptor outer segment phototransduction visual perception	GO:0001750 GO:0004930 GO:0007601 GO:0007602 GO:0009881 GO:0016020 GO:0046872
Voltage-dependent L-type calcium channel subunit alpha	H3D4N0	CACNA1F	Tetraodon nigroviridis	99883	1	metal ion binding regulation of monoatomic ion transmembrane transport voltage-gated calcium channel activity voltage-gated calcium channel complex	GO:0005245 GO:0005891 GO:0034765 GO:0046872
Voltage-dependent L-type calcium channel subunit alpha	H3D393	CACNA1D	Tetraodon nigroviridis	99883	1	metal ion binding regulation of monoatomic ion transmembrane transport voltage-gated calcium channel activity voltage-gated calcium channel complex	GO:0005245 GO:0005891 GO:0034765 GO:0046872
Bone morphogenetic protein 2	Q804S2	bmp2	Tetraodon nigroviridis	99883	5	BMP signaling pathway cartilage development cell-cell signaling involved in cell fate commitment cytokine activity determination of left/right symmetry determination of ventral identity dorsal convergence dorsal/ventral axis specification embryonic viscerocranium morphogenesis enteric nervous system development extracellular space growth factor activity hypoblast development identical protein binding liver development locus ceruleus development mesodermal cell fate commitment negative regulation of endodermal cell fate specification neural crest cell migration involved in autonomic nervous system development neurogenesis notochord development ossification pancreas field specification positive regulation of BMP signaling pathway protein heterodimerization activity protein-containing complex assembly semicircular canal formation ventricular cardiac muscle cell development	GO:0001503 GO:0001710 GO:0001889 GO:0005125 GO:0005615 GO:0007368 GO:0008083 GO:0009950 GO:0021703 GO:0022008 GO:0030509 GO:0030513 GO:0030903 GO:0042664 GO:0042802 GO:0045168 GO:0046982 GO:0048264 GO:0048484 GO:0048703 GO:0051216 GO:0055015 GO:0060030 GO:0060876 GO:0061131 GO:0065003 GO:0090008 GO:1901166
Rhodopsin	Q9DGG4	rho	Tetraodon nigroviridis	99883	3	11-cis retinal binding G protein-coupled photoreceptor activity absorption of visible light membrane photoreceptor disc membrane plasma membrane rhodopsin mediated signaling pathway visual perception	GO:0005502 GO:0005886 GO:0007601 GO:0008020 GO:0016020 GO:0016038 GO:0016056 GO:0097381
Hyaluronidase (Fragment)	Q4S7W3	GSTENG00022608001	Tetraodon nigroviridis	99883	1	carbohydrate metabolic process hyalurononglucosaminidase activity	GO:0004415 GO:0005975
Hyaluronidase	H3C5A1	HYAL4	Tetraodon nigroviridis	99883	1	carbohydrate metabolic process hyalurononglucosaminidase activity	GO:0004415 GO:0005975
Fibroblast growth factor receptor	Q4S2G2	GSTENG00025098001	Tetraodon nigroviridis	99883	8	ATP binding fibroblast growth factor receptor activity phosphorylation plasma membrane positive regulation of cell population proliferation	GO:0005007 GO:0005524 GO:0005886 GO:0008284 GO:0016310
Sodium channel protein type 4 subunit alpha A	Q2XVR5	scn4aa	Tetraodon nigroviridis	99883	6	calcium ion binding regulation of monoatomic ion transmembrane transport voltage-gated monoatomic ion channel activity voltage-gated sodium channel activity voltage-gated sodium channel complex	GO:0001518 GO:0005244 GO:0005248 GO:0005509 GO:0034765
Pannexin	Q4SVS6	PANX	Tetraodon nigroviridis	99883	1	channel activity gap junction monoatomic cation transport plasma membrane positive regulation of interleukin-1 production	GO:0005886 GO:0005921 GO:0006812 GO:0015267 GO:0032732