GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name ▲	UniProt ID	Gene Symbol	Species	Taxonomy ID	No. of Glycosylation Sites	GO Labels	GO IDs
28 kDa heat- and acid-stable phosphoprotein	Q13442	PDAP1	Homo sapiens	9606		RNA binding cytosol extracellular region ficolin-1-rich granule lumen plasma membrane signal transduction	GO:0003723 GO:0005576 GO:0005829 GO:0005886 GO:0007165 GO:1904813
28 kDa heat- and acid-stable phosphoprotein	Q3UHX2	Pdap1	Mus musculus	10090		cytosol extracellular space plasma membrane platelet-derived growth factor binding platelet-derived growth factor receptor signaling pathway	GO:0005615 GO:0005829 GO:0005886 GO:0048008 GO:0048407
28S rRNA (cytosine-C(5))-methyltransferase	Q96P11	NSUN5	Homo sapiens	9606		RNA binding cerebral cortex development cognition corpus callosum development nucleolus nucleoplasm oligodendrocyte development positive regulation of translation rRNA (cytosine-C5-)-methyltransferase activity rRNA base methylation regulation of myelination	GO:0003723 GO:0005654 GO:0005730 GO:0009383 GO:0014003 GO:0021987 GO:0022038 GO:0031641 GO:0045727 GO:0050890 GO:0070475
2L protein	Q9DHW0	2L	Yaba-like disease virus	132475	3	peptidase activity protein serine/threonine kinase activity proteolysis	GO:0004674 GO:0006508 GO:0008233
2S albumin seed storage protein PINP1	A0A0K3AVY3	PINP1	Pinus pinea	3346	1	nutrient reservoir activity	GO:0045735
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1	P14060	HSD3B1	Homo sapiens	9606		3-beta-hydroxy-delta5-steroid dehydrogenase activity 3-keto sterol reductase activity 5alpha-androstane-3beta,17beta-diol dehydrogenase activity C21-steroid hormone metabolic process androgen biosynthetic process cholesterol dehydrogenase activity cytoplasm endoplasmic reticulum endoplasmic reticulum membrane estrogen biosynthetic process hippocampus development intercellular bridge intracellular membrane-bounded organelle mitochondrial inner membrane mitochondrial intermembrane space nucleolus oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor response to corticosterone smooth endoplasmic reticulum membrane steroid biosynthetic process steroid delta-isomerase activity	GO:0000253 GO:0003854 GO:0004769 GO:0005730 GO:0005737 GO:0005743 GO:0005758 GO:0005783 GO:0005789 GO:0006694 GO:0006702 GO:0006703 GO:0008207 GO:0016616 GO:0021766 GO:0030868 GO:0043231 GO:0045171 GO:0047024 GO:0051412 GO:0102294
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 3	P26150	Hsd3b3	Mus musculus	10090		3-beta-hydroxy-delta5-steroid dehydrogenase activity C21-steroid hormone biosynthetic process C21-steroid hormone metabolic process androgen biosynthetic process cholesterol dehydrogenase activity cytoplasm endoplasmic reticulum endoplasmic reticulum membrane hippocampus development intercellular bridge intracellular membrane-bounded organelle mitochondrial inner membrane mitochondrial intermembrane space negative regulation of iron ion transport nucleolus oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor response to corticosterone steroid biosynthetic process steroid delta-isomerase activity	GO:0003854 GO:0004769 GO:0005730 GO:0005737 GO:0005743 GO:0005758 GO:0005783 GO:0005789 GO:0006694 GO:0006700 GO:0006702 GO:0008207 GO:0016616 GO:0021766 GO:0034757 GO:0043231 GO:0045171 GO:0051412 GO:0102294
3'(2'), 5'-bisphosphate nucleotidase 1	A0A1B0GRV0	Bpnt1	Mus musculus	10090		metal ion binding phosphatidylinositol phosphate biosynthetic process	GO:0046854 GO:0046872
3'(2'),5'-bisphosphate nucleotidase 1	Q9Z0S1	Bpnt1	Mus musculus	10090		3'(2'),5'-bisphosphate nucleotidase activity inositol-1,4-bisphosphate 1-phosphatase activity magnesium ion binding phosphatidylinositol phosphate biosynthetic process	GO:0000287 GO:0004441 GO:0008441 GO:0046854
3'(2'),5'-bisphosphate nucleotidase 1	O95861	BPNT1	Homo sapiens	9606	1	3'(2'),5'-bisphosphate nucleotidase activity 3'-phosphoadenosine 5'-phosphosulfate metabolic process cytosol metal ion binding nervous system development nucleobase-containing compound metabolic process phosphatidylinositol phosphate biosynthetic process	GO:0005829 GO:0006139 GO:0007399 GO:0008441 GO:0046854 GO:0046872 GO:0050427