GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID Gene Symbol Species Taxonomy ID ▲ No. of Glycosylation Sites GO Labels GO IDs
  • Kcnk1
10029
1
  • dendrite
  • perikaryon
  • potassium channel activity
  • recycling endosome
  • synaptic membrane
  • GO:0005267
  • GO:0030425
  • GO:0043204
  • GO:0055037
  • GO:0097060
  • TLR4
10029
11
  • B cell proliferation involved in immune response
  • ERK1 and ERK2 cascade
  • JNK cascade
  • MHC class II biosynthetic process
  • MyD88-dependent toll-like receptor signaling pathway
  • NAD(P)+ nucleosidase activity
  • NAD+ nucleotidase, cyclic ADP-ribose generating
  • TRIF-dependent toll-like receptor signaling pathway
  • astrocyte development
  • canonical NF-kappaB signal transduction
  • cellular response to amyloid-beta
  • cellular response to lipoteichoic acid
  • cellular response to mechanical stimulus
  • cellular response to oxidised low-density lipoprotein particle stimulus
  • cellular response to platelet-derived growth factor stimulus
  • cellular response to type II interferon
  • defense response to Gram-negative bacterium
  • detection of lipopolysaccharide
  • early endosome
  • external side of plasma membrane
  • gene expression
  • identical protein binding
  • intestinal epithelial structure maintenance
  • lipopolysaccharide binding
  • lipopolysaccharide immune receptor activity
  • lipopolysaccharide receptor complex
  • macrophage activation
  • microglia differentiation
  • negative regulation of ERK1 and ERK2 cascade
  • negative regulation of cold-induced thermogenesis
  • negative regulation of interleukin-17 production
  • negative regulation of interleukin-23 production
  • negative regulation of interleukin-6 production
  • negative regulation of tumor necrosis factor production
  • negative regulation of type II interferon production
  • nitric oxide biosynthetic process
  • nitric oxide production involved in inflammatory response
  • nucleotide-binding oligomerization domain containing 1 signaling pathway
  • nucleotide-binding oligomerization domain containing 2 signaling pathway
  • perinuclear region of cytoplasm
  • phagocytic cup
  • phagocytosis
  • positive regulation of B cell proliferation
  • positive regulation of ERK1 and ERK2 cascade
  • positive regulation of JNK cascade
  • positive regulation of MHC class II biosynthetic process
  • positive regulation of NLRP3 inflammasome complex assembly
  • positive regulation of canonical NF-kappaB signal transduction
  • positive regulation of cellular response to macrophage colony-stimulating factor stimulus
  • positive regulation of chemokine (C-X-C motif) ligand 2 production
  • positive regulation of cytokine production involved in inflammatory response
  • positive regulation of extrinsic apoptotic signaling pathway
  • positive regulation of inflammatory response
  • positive regulation of interferon-alpha production
  • positive regulation of interferon-beta production
  • positive regulation of interleukin-1 beta production
  • positive regulation of interleukin-10 production
  • positive regulation of interleukin-12 production
  • positive regulation of interleukin-6 production
  • positive regulation of interleukin-8 production
  • positive regulation of macrophage activation
  • positive regulation of macrophage cytokine production
  • positive regulation of matrix metallopeptidase secretion
  • positive regulation of nitric oxide biosynthetic process
  • positive regulation of nitric-oxide synthase biosynthetic process
  • positive regulation of non-canonical NF-kappaB signal transduction
  • positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway
  • positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway
  • positive regulation of platelet activation
  • positive regulation of reactive oxygen species biosynthetic process
  • positive regulation of smooth muscle cell migration
  • positive regulation of smooth muscle cell proliferation
  • positive regulation of transcription by RNA polymerase II
  • positive regulation of tumor necrosis factor production
  • positive regulation of type II interferon production
  • protein heterodimerization activity
  • regulation of dendritic cell cytokine production
  • ruffle
  • signaling receptor binding
  • toll-like receptor 4 signaling pathway
  • transmembrane signaling receptor activity
  • wound healing involved in inflammatory response
  • GO:0001530
  • GO:0001726
  • GO:0001875
  • GO:0001891
  • GO:0002246
  • GO:0002322
  • GO:0002537
  • GO:0002730
  • GO:0002755
  • GO:0004888
  • GO:0005102
  • GO:0005769
  • GO:0006809
  • GO:0006909
  • GO:0007249
  • GO:0007254
  • GO:0009897
  • GO:0010467
  • GO:0010572
  • GO:0014002
  • GO:0014004
  • GO:0014911
  • GO:0030890
  • GO:0032497
  • GO:0032689
  • GO:0032700
  • GO:0032707
  • GO:0032715
  • GO:0032720
  • GO:0032727
  • GO:0032728
  • GO:0032729
  • GO:0032731
  • GO:0032733
  • GO:0032735
  • GO:0032755
  • GO:0032757
  • GO:0032760
  • GO:0034142
  • GO:0035666
  • GO:0036120
  • GO:0042116
  • GO:0042802
  • GO:0043032
  • GO:0043123
  • GO:0045342
  • GO:0045348
  • GO:0045429
  • GO:0045944
  • GO:0046330
  • GO:0046696
  • GO:0046982
  • GO:0048471
  • GO:0048661
  • GO:0050135
  • GO:0050729
  • GO:0050829
  • GO:0051770
  • GO:0060729
  • GO:0060907
  • GO:0061809
  • GO:0070371
  • GO:0070373
  • GO:0070374
  • GO:0070427
  • GO:0070430
  • GO:0070431
  • GO:0070434
  • GO:0071223
  • GO:0071260
  • GO:0071346
  • GO:0120163
  • GO:0140052
  • GO:1900017
  • GO:1900227
  • GO:1901224
  • GO:1903428
  • GO:1903974
  • GO:1904466
  • GO:1904646
  • GO:2000343
  • GO:2001238
  • P2rx4
10029
1
  • ATP binding
  • extracellularly ATP-gated monoatomic cation channel activity
  • plasma membrane
  • postsynapse
  • purinergic nucleotide receptor activity
  • response to ATP
  • GO:0001614
  • GO:0004931
  • GO:0005524
  • GO:0005886
  • GO:0033198
  • GO:0098794
  • Naaa
10029
4
  • DNA-binding transcription factor binding
  • N-(long-chain-acyl)ethanolamine deacylase activity
  • N-acylethanolamine metabolic process
  • N-acylphosphatidylethanolamine metabolic process
  • N-acylsphingosine amidohydrolase activity
  • ceramidase activity
  • fatty acid amide hydrolase activity
  • fatty acid metabolic process
  • lysosome
  • membrane
  • sphingosine metabolic process
  • GO:0005764
  • GO:0006631
  • GO:0006670
  • GO:0016020
  • GO:0017040
  • GO:0017064
  • GO:0047412
  • GO:0070291
  • GO:0070292
  • GO:0102121
  • GO:0140297
  • B3gat2
10029
1
  • Golgi membrane
  • galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
  • metal ion binding
  • GO:0000139
  • GO:0015018
  • GO:0046872
  • Pon3
10029
2
  • arylesterase activity
  • metal ion binding
  • GO:0004064
  • GO:0046872
  • NOTCH1
10029
47
  • Golgi lumen
  • Golgi membrane
  • Notch signaling involved in heart development
  • adherens junction
  • angiogenesis
  • apical plasma membrane
  • calcium ion binding
  • cell differentiation
  • cilium assembly
  • nucleus
  • regulation of DNA-templated transcription
  • regulation of developmental process
  • signaling receptor activity
  • GO:0000139
  • GO:0001525
  • GO:0005509
  • GO:0005634
  • GO:0005796
  • GO:0005912
  • GO:0006355
  • GO:0016324
  • GO:0030154
  • GO:0038023
  • GO:0050793
  • GO:0060271
  • GO:0061314
  • H671_4g12128
10029
1
  • acid phosphatase activity
  • metal ion binding
  • GO:0003993
  • GO:0046872
  • MBTPS1
10029
6
  • Golgi membrane
  • Golgi stack
  • cholesterol metabolic process
  • endoplasmic reticulum membrane
  • lysosome organization
  • membrane protein intracellular domain proteolysis
  • mitotic G2 DNA damage checkpoint signaling
  • protein processing
  • proteolysis
  • regulation of vesicle-mediated transport
  • response to endoplasmic reticulum stress
  • serine-type endopeptidase activity
  • GO:0000139
  • GO:0004252
  • GO:0005789
  • GO:0005795
  • GO:0006508
  • GO:0007040
  • GO:0007095
  • GO:0008203
  • GO:0016485
  • GO:0031293
  • GO:0034976
  • GO:0060627
  • ITGA3
10029
12
  • anchoring junction
  • cell adhesion
  • filopodium membrane
  • integrin complex
  • integrin-mediated signaling pathway
  • metal ion binding
  • positive regulation of protein localization to plasma membrane
  • protein heterodimerization activity
  • GO:0007155
  • GO:0007229
  • GO:0008305
  • GO:0031527
  • GO:0046872
  • GO:0046982
  • GO:0070161
  • GO:1903078
Displaying entries 291 - 300 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01