GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID Gene Symbol ▲ Species Taxonomy ID No. of Glycosylation Sites GO Labels GO IDs
  • 25501785
3880
1
  • apoplast
  • cell wall biogenesis
  • cell wall organization
  • hydrolase activity, hydrolyzing O-glycosyl compounds
  • membrane
  • xyloglucan metabolic process
  • xyloglucan:xyloglucosyl transferase activity
  • GO:0004553
  • GO:0010411
  • GO:0016020
  • GO:0016762
  • GO:0042546
  • GO:0048046
  • GO:0071555
  • 26-29-p
7227
  • Toll receptor ligand protein activation cascade
  • cysteine-type endopeptidase activator activity involved in apoptotic process
  • cysteine-type endopeptidase activity
  • cysteine-type peptidase activity
  • extracellular space
  • immune response
  • positive regulation of apoptotic signaling pathway
  • proteolysis involved in protein catabolic process
  • zymogen activation
  • GO:0004197
  • GO:0005615
  • GO:0006955
  • GO:0008234
  • GO:0008656
  • GO:0031638
  • GO:0051603
  • GO:0160032
  • GO:2001235
  • 2810021J22Rik
10090
2
  • DNA-binding transcription repressor activity, RNA polymerase II-specific
  • RNA polymerase II transcription regulatory region sequence-specific DNA binding
  • metal ion binding
  • negative regulation of transcription by RNA polymerase II
  • GO:0000122
  • GO:0000977
  • GO:0001227
  • GO:0046872
  • 29C
44689
1
  • extracellular region
  • GO:0005576
  • 2L
132475
3
  • peptidase activity
  • protein serine/threonine kinase activity
  • proteolysis
  • GO:0004674
  • GO:0006508
  • GO:0008233
  • 2MMP
3702
9
  • apoplast
  • defense response to fungus
  • developmental vegetative growth
  • extracellular matrix
  • metalloendopeptidase activity
  • metallopeptidase activity
  • negative regulation of leaf senescence
  • plasma membrane
  • proteolysis
  • regulation of photoperiodism, flowering
  • response to cadmium ion
  • response to jasmonic acid
  • response to salt stress
  • side of membrane
  • zinc ion binding
  • GO:0004222
  • GO:0005886
  • GO:0006508
  • GO:0008237
  • GO:0008270
  • GO:0009651
  • GO:0009753
  • GO:0031012
  • GO:0046686
  • GO:0048046
  • GO:0050832
  • GO:0080186
  • GO:0098552
  • GO:1900056
  • GO:2000028
  • 3
442736
4
  • extracellular region
  • host cell Golgi membrane
  • host cell plasma membrane
  • membrane
  • monoatomic ion channel activity
  • protein complex oligomerization
  • virion component
  • virus-mediated pore formation in host cell membrane
  • GO:0005216
  • GO:0005576
  • GO:0016020
  • GO:0020002
  • GO:0039707
  • GO:0044178
  • GO:0044423
  • GO:0051259
  • 3
10090
1
  • proteolysis
  • serine-type endopeptidase activity
  • GO:0004252
  • GO:0006508
  • 3
389167
4
  • extracellular region
  • host cell Golgi membrane
  • host cell plasma membrane
  • membrane
  • monoatomic ion channel activity
  • protein complex oligomerization
  • virion component
  • virus-mediated pore formation in host cell membrane
  • GO:0005216
  • GO:0005576
  • GO:0016020
  • GO:0020002
  • GO:0039707
  • GO:0044178
  • GO:0044423
  • GO:0051259
  • 3
349344
4
  • extracellular region
  • host cell Golgi membrane
  • host cell plasma membrane
  • membrane
  • monoatomic ion channel activity
  • protein complex oligomerization
  • virion component
  • virus-mediated pore formation in host cell membrane
  • GO:0005216
  • GO:0005576
  • GO:0016020
  • GO:0020002
  • GO:0039707
  • GO:0044178
  • GO:0044423
  • GO:0051259
Displaying entries 301 - 310 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01