GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name ▼ UniProt ID Gene Symbol Species Taxonomy ID No. of Glycosylation Sites GO Labels GO IDs
  • TGVEG_288360
432359
  • ATP binding
  • tryptophan-tRNA ligase activity
  • tryptophanyl-tRNA aminoacylation
  • GO:0004830
  • GO:0005524
  • GO:0006436
  • TCDM_02953
1416333
  • ATP binding
  • tryptophan-tRNA ligase activity
  • tryptophanyl-tRNA aminoacylation
  • GO:0004830
  • GO:0005524
  • GO:0006436
  • lip2
4952
2
  • lipid catabolic process
  • triglyceride lipase activity
  • GO:0004806
  • GO:0016042
  • TCDM_08438
1416333
  • ATP binding
  • cytoplasm
  • threonine-tRNA ligase activity
  • threonyl-tRNA aminoacylation
  • GO:0004829
  • GO:0005524
  • GO:0005737
  • GO:0006435
  • Txnrd2
10090
  • axon
  • cell redox homeostasis
  • cytosol
  • dendrite
  • flavin adenine dinucleotide binding
  • mitochondrion
  • neuronal cell body
  • protein homodimerization activity
  • protein-containing complex binding
  • response to hyperoxia
  • response to oxidative stress
  • response to selenium ion
  • response to xenobiotic stimulus
  • thioredoxin-disulfide reductase (NADP) activity
  • GO:0004791
  • GO:0005739
  • GO:0005829
  • GO:0006979
  • GO:0009410
  • GO:0010269
  • GO:0030424
  • GO:0030425
  • GO:0042803
  • GO:0043025
  • GO:0044877
  • GO:0045454
  • GO:0050660
  • GO:0055093
  • DTWD2
9606
1
  • cytoplasm
  • nucleus
  • tRNA modification
  • tRNA-uridine aminocarboxypropyltransferase activity
  • GO:0005634
  • GO:0005737
  • GO:0006400
  • GO:0016432
  • TSEN54
9606
  • mRNA processing
  • nucleolus
  • nucleoplasm
  • tRNA splicing, via endonucleolytic cleavage and ligation
  • tRNA-intron endonuclease complex
  • tRNA-type intron splice site recognition and cleavage
  • GO:0000214
  • GO:0000379
  • GO:0005654
  • GO:0005730
  • GO:0006388
  • GO:0006397
  • TSEN34
9606
  • lyase activity
  • mRNA processing
  • nucleic acid binding
  • nucleolus
  • nucleoplasm
  • tRNA-intron endonuclease activity
  • tRNA-intron endonuclease complex
  • tRNA-type intron splice site recognition and cleavage
  • GO:0000213
  • GO:0000214
  • GO:0000379
  • GO:0003676
  • GO:0005654
  • GO:0005730
  • GO:0006397
  • GO:0016829
  • TSEN2
9606
  • centrosome
  • cytosol
  • lyase activity
  • mRNA processing
  • nucleic acid binding
  • nucleolus
  • nucleoplasm
  • tRNA splicing, via endonucleolytic cleavage and ligation
  • tRNA-intron endonuclease activity
  • tRNA-intron endonuclease complex
  • tRNA-type intron splice site recognition and cleavage
  • GO:0000213
  • GO:0000214
  • GO:0000379
  • GO:0003676
  • GO:0005654
  • GO:0005730
  • GO:0005813
  • GO:0005829
  • GO:0006388
  • GO:0006397
  • GO:0016829
  • TSEN15
9606
  • mRNA processing
  • nucleic acid binding
  • nucleolus
  • nucleoplasm
  • tRNA splicing, via endonucleolytic cleavage and ligation
  • GO:0003676
  • GO:0005654
  • GO:0005730
  • GO:0006388
  • GO:0006397
Displaying entries 51 - 60 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01