GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name	UniProt ID	Gene Symbol	Species	Taxonomy ID	No. of Glycosylation Sites	GO Labels ▼	GO IDs
Expansin-A14	Q4PR51	EXPA14	Oryza sativa Japonica Group	39947	1	anatomical structure morphogenesis extracellular region membrane plant-type cell wall organization	GO:0005576 GO:0009653 GO:0009664 GO:0016020
Inducible metalloproteinase inhibitor protein	P82176	IMPI	Galleria mellonella	7137	2	anatomical structure morphogenesis extracellular matrix organization extracellular space metalloendopeptidase inhibitor activity wound healing	GO:0005615 GO:0008191 GO:0009653 GO:0030198 GO:0042060
NEDD8	Q15843	NEDD8	Homo sapiens	9606		anatomical structure morphogenesis cytosol extracellular exosome modification-dependent protein catabolic process nucleoplasm nucleus protein localization protein modification process protein neddylation protein tag activity proteolysis regulation of proteolysis regulation of transcription by RNA polymerase II ubiquitin protein ligase binding ubiquitin-dependent protein catabolic process	GO:0005634 GO:0005654 GO:0005829 GO:0006357 GO:0006508 GO:0006511 GO:0008104 GO:0009653 GO:0019941 GO:0030162 GO:0031386 GO:0031625 GO:0036211 GO:0045116 GO:0070062
E3 ubiquitin-protein ligase TRIM13	O60858	TRIM13	Homo sapiens	9606	1	anatomical structure morphogenesis cytoplasm endoplasmic reticulum membrane innate immune response negative regulation of viral transcription perinuclear endoplasmic reticulum positive regulation of NF-kappaB transcription factor activity positive regulation of canonical NF-kappaB signal transduction positive regulation of macroautophagy proteasome-mediated ubiquitin-dependent protein catabolic process protein autoubiquitination protein ubiquitination suppression of viral release by host transcription coactivator activity ubiquitin protein ligase activity ubiquitin-dependent ERAD pathway ubiquitin-like protein ligase activity ubiquitin-protein transferase activity zinc ion binding	GO:0003713 GO:0004842 GO:0005737 GO:0005789 GO:0008270 GO:0009653 GO:0016239 GO:0016567 GO:0030433 GO:0032897 GO:0043123 GO:0043161 GO:0044790 GO:0045087 GO:0051092 GO:0051865 GO:0061630 GO:0061659 GO:0097038
Bone morphogenetic protein 3	Q7T2X7	bmp3	Xenopus laevis	8355	2	anatomical structure morphogenesis cytokine activity extracellular space growth factor activity morphogen activity osteoblast differentiation	GO:0001649 GO:0005125 GO:0005615 GO:0008083 GO:0009653 GO:0016015
Growth/differentiation factor 10	Q7T2X6	gdf10	Xenopus laevis	8355	2	anatomical structure morphogenesis cytokine activity extracellular space growth factor activity morphogen activity nodal binding osteoblast differentiation	GO:0001649 GO:0005125 GO:0005615 GO:0008083 GO:0009653 GO:0016015 GO:0038100
Protein let-653	Q27394	let-653	Caenorhabditis elegans	6239	4	anatomical structure morphogenesis cuticle pattern formation cytoplasmic side of apical plasma membrane embryonic ectodermal digestive tract morphogenesis epithelial cell development external side of apical plasma membrane extracellular space negative regulation of tube lumen cavitation positive regulation of epithelial tube formation positive regulation of multicellular organism growth positive regulation of nematode larval development positive regulation of vulval development regulation of tube size structural constituent of cuticle supramolecular fiber	GO:0002064 GO:0005615 GO:0009653 GO:0035017 GO:0035150 GO:0040018 GO:0040026 GO:0042302 GO:0048613 GO:0061063 GO:0098591 GO:0098592 GO:0099512 GO:1903133 GO:1905278
Cystatin-M	Q15828	CST6	Homo sapiens	9606	1	anatomical structure morphogenesis cornified envelope cysteine-type endopeptidase inhibitor activity epidermis development extracellular exosome	GO:0001533 GO:0004869 GO:0008544 GO:0009653 GO:0070062
FRAS1-related extracellular matrix protein 1	Q8IG72	C48E7.6	Caenorhabditis elegans	6239	2	anatomical structure morphogenesis collagen-containing extracellular matrix membrane	GO:0009653 GO:0016020 GO:0062023
Clathrin heavy chain 2	P53675	CLTCL1	Homo sapiens	9606	2	anatomical structure morphogenesis clathrin coat of trans-Golgi network vesicle clathrin complex clathrin light chain binding clathrin-coated endocytic vesicle clathrin-coated pit clathrin-coated vesicle coated vesicle cytosol extracellular exosome intracellular protein transport late endosome membrane mitotic cell cycle positive regulation of glucose import receptor-mediated endocytosis retrograde transport, endosome to Golgi sorting endosome spindle structural molecule activity trans-Golgi network	GO:0000278 GO:0005198 GO:0005770 GO:0005802 GO:0005819 GO:0005829 GO:0005905 GO:0006886 GO:0006898 GO:0009653 GO:0016020 GO:0030130 GO:0030135 GO:0030136 GO:0032051 GO:0042147 GO:0045334 GO:0046326 GO:0070062 GO:0071439 GO:0097443