GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name	UniProt ID	Gene Symbol	Species	Taxonomy ID	No. of Glycosylation Sites	GO Labels	GO IDs
Igh protein	Q8VCX4	Igh	Mus musculus	10090	2
7-deoxyloganic acid hydroxylase	U5NE19	7DLH	Catharanthus roseus	4058	2	7-deoxyloganate 7-hydroxylase activity 7-deoxyloganin 7-hydroxylase activity endoplasmic reticulum endoplasmic reticulum membrane heme binding indole alkaloid metabolic process iron ion binding response to jasmonic acid	GO:0005506 GO:0005783 GO:0005789 GO:0009753 GO:0020037 GO:0035834 GO:0050595 GO:0140989
Phospholipid phosphatase 1	P60588	PLPP1	Sus scrofa	9823	1	apical plasma membrane caveola ceramide metabolic process ceramide-1-phosphate phosphatase activity diacylglycerol diphosphate phosphatase activity membrane membrane raft phosphatidate phosphatase activity phospholipid catabolic process phospholipid dephosphorylation phospholipid metabolic process plasma membrane signal transduction sphingosine metabolic process sphingosine-1-phosphate phosphatase activity	GO:0000810 GO:0005886 GO:0005901 GO:0006644 GO:0006670 GO:0006672 GO:0007165 GO:0008195 GO:0009395 GO:0016020 GO:0016324 GO:0042392 GO:0045121 GO:0046839 GO:0106235
Ras-related protein Rab-3A	P20336	RAB3A	Homo sapiens	9606		GTP binding GTP-dependent protein binding GTPase activity acrosomal vesicle acrosomal vesicle exocytosis axon axonogenesis calcium-ion regulated exocytosis clathrin-sculpted acetylcholine transport vesicle membrane clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane clathrin-sculpted glutamate transport vesicle membrane clathrin-sculpted monoamine transport vesicle membrane constitutive secretory pathway cytosol endosome evoked neurotransmitter secretion exocytosis extracellular vesicle insulin secretion lung development lysosome lysosome localization maintenance of presynaptic active zone structure mitochondrion organization myosin V binding neuromuscular synaptic transmission perinuclear region of cytoplasm plasma membrane plasma membrane repair positive regulation of exocytosis positive regulation of regulated secretory pathway post-embryonic development postsynapse presynapse presynaptic active zone protein localization to plasma membrane protein secretion protein-macromolecule adaptor activity regulated exocytosis regulation of exocytosis regulation of plasma membrane repair regulation of presynaptic dense core granule exocytosis regulation of short-term neuronal synaptic plasticity regulation of synaptic vesicle fusion to presynaptic active zone membrane respiratory system process response to electrical stimulus secretory granule membrane sensory perception of touch synaptic vesicle synaptic vesicle clustering synaptic vesicle exocytosis synaptic vesicle maturation synaptic vesicle membrane synaptic vesicle recycling synaptic vesicle transport terminal bouton vesicle docking involved in exocytosis	GO:0001669 GO:0001778 GO:0003016 GO:0003924 GO:0005525 GO:0005764 GO:0005768 GO:0005829 GO:0005886 GO:0006887 GO:0006904 GO:0007005 GO:0007274 GO:0007409 GO:0008021 GO:0009306 GO:0009791 GO:0016079 GO:0016188 GO:0017156 GO:0017157 GO:0030073 GO:0030324 GO:0030424 GO:0030667 GO:0030672 GO:0030674 GO:0030742 GO:0031489 GO:0031630 GO:0032418 GO:0036465 GO:0043195 GO:0045054 GO:0045055 GO:0045921 GO:0048172 GO:0048471 GO:0048489 GO:0048786 GO:0048790 GO:0050975 GO:0051602 GO:0060201 GO:0060203 GO:0060478 GO:0061202 GO:0061670 GO:0070083 GO:0072659 GO:0097091 GO:0098793 GO:0098794 GO:0099161 GO:1903307 GO:1903561 GO:1905684
Xyloglucan endotransglucosylase/hydrolase	G1FC38	XTH	Tagetes patula	55843	1	apoplast cell wall biogenesis cell wall organization hydrolase activity, hydrolyzing O-glycosyl compounds xyloglucan metabolic process xyloglucan:xyloglucosyl transferase activity	GO:0004553 GO:0010411 GO:0016762 GO:0042546 GO:0048046 GO:0071555
Xyloglucan endotransglucosylase/hydrolase	A0A8T0RBX4	PVAP13_6KG188800	Panicum virgatum	38727	1	apoplast cell wall biogenesis cell wall organization hydrolase activity, hydrolyzing O-glycosyl compounds xyloglucan metabolic process xyloglucan:xyloglucosyl transferase activity	GO:0004553 GO:0010411 GO:0016762 GO:0042546 GO:0048046 GO:0071555
Mediator of RNA polymerase II transcription subunit 16	Q9Y2X0	MED16	Homo sapiens	9606	1	RNA polymerase II preinitiation complex assembly core mediator complex mediator complex membrane nuclear thyroid hormone receptor binding nuclear vitamin D receptor binding nucleoplasm nucleus positive regulation of DNA-templated transcription positive regulation of transcription elongation by RNA polymerase II positive regulation of transcription initiation by RNA polymerase II regulation of transcription by RNA polymerase II transcription by RNA polymerase II transcription coactivator activity	GO:0003713 GO:0005634 GO:0005654 GO:0006357 GO:0006366 GO:0016020 GO:0016592 GO:0032968 GO:0042809 GO:0045893 GO:0046966 GO:0051123 GO:0060261 GO:0070847
Rhodopsin (Fragment)	A0A3G5CGQ5	rh1	Nemichthys scolopaceus	118170	1	G protein-coupled receptor activity membrane metal ion binding photoreceptor activity phototransduction visual perception	GO:0004930 GO:0007601 GO:0007602 GO:0009881 GO:0016020 GO:0046872
FIC domain-containing protein (Fragment)	A0A0F6QL66	Ficd	Menidia menidia	238744	1	ATP binding	GO:0005524
Growth/differentiation factor 10	P55108	Gdf10	Rattus norvegicus	10116	4	cerebellum development cytokine activity extracellular space fat cell differentiation growth factor activity negative regulation of osteoblast differentiation osteoblast differentiation ovulation cycle positive regulation of osteoblast differentiation regulation of ossification response to kainic acid response to transforming growth factor beta	GO:0001649 GO:0005125 GO:0005615 GO:0008083 GO:0021549 GO:0030278 GO:0042698 GO:0045444 GO:0045668 GO:0045669 GO:0071559 GO:1904373