GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID ▲ Gene Symbol Species Taxonomy ID No. of Glycosylation Sites GO Labels GO IDs
  • FGFR2
9823
8
  • ATP binding
  • cell cortex
  • cell surface
  • collagen-containing extracellular matrix
  • embryonic cranial skeleton morphogenesis
  • fibroblast growth factor binding
  • fibroblast growth factor receptor activity
  • negative regulation of keratinocyte proliferation
  • nucleus
  • phosphorylation
  • plasma membrane
  • positive regulation of MAPK cascade
  • positive regulation of cell population proliferation
  • protein homodimerization activity
  • GO:0005007
  • GO:0005524
  • GO:0005634
  • GO:0005886
  • GO:0005938
  • GO:0008284
  • GO:0009986
  • GO:0010839
  • GO:0016310
  • GO:0017134
  • GO:0042803
  • GO:0043410
  • GO:0048701
  • GO:0062023
  • 100807653
3847
1
  • apoplast
  • cell wall biogenesis
  • cell wall organization
  • hydrolase activity, hydrolyzing O-glycosyl compounds
  • xyloglucan metabolic process
  • xyloglucan:xyloglucosyl transferase activity
  • GO:0004553
  • GO:0010411
  • GO:0016762
  • GO:0042546
  • GO:0048046
  • GO:0071555
  • 100797033
3847
1
  • Golgi apparatus
  • UDP-L-arabinose metabolic process
  • cell wall organization
  • cytosol
  • intramolecular transferase activity
  • plant-type cell wall biogenesis
  • GO:0005794
  • GO:0005829
  • GO:0009832
  • GO:0016866
  • GO:0033356
  • GO:0071555
  • HA
11320
7
  • apical plasma membrane
  • clathrin-dependent endocytosis of virus by host cell
  • fusion of virus membrane with host endosome membrane
  • fusion of virus membrane with host plasma membrane
  • host cell plasma membrane
  • host cell surface receptor binding
  • viral budding from plasma membrane
  • viral envelope
  • virion attachment to host cell
  • virion membrane
  • GO:0016324
  • GO:0019031
  • GO:0019062
  • GO:0019064
  • GO:0020002
  • GO:0039654
  • GO:0046761
  • GO:0046789
  • GO:0055036
  • GO:0075512
  • NA
119210
5
  • carbohydrate metabolic process
  • exo-alpha-(2->3)-sialidase activity
  • exo-alpha-(2->6)-sialidase activity
  • exo-alpha-(2->8)-sialidase activity
  • host cell plasma membrane
  • membrane
  • metal ion binding
  • viral budding from plasma membrane
  • virion membrane
  • GO:0005975
  • GO:0016020
  • GO:0020002
  • GO:0046761
  • GO:0046872
  • GO:0052794
  • GO:0052795
  • GO:0052796
  • GO:0055036
  • NA
119210
4
  • carbohydrate metabolic process
  • exo-alpha-(2->3)-sialidase activity
  • exo-alpha-(2->6)-sialidase activity
  • exo-alpha-(2->8)-sialidase activity
  • host cell plasma membrane
  • membrane
  • metal ion binding
  • viral budding from plasma membrane
  • virion membrane
  • GO:0005975
  • GO:0016020
  • GO:0020002
  • GO:0046761
  • GO:0046872
  • GO:0052794
  • GO:0052795
  • GO:0052796
  • GO:0055036
  • Sirpb1c
10090
1
  • membrane
  • plasma membrane
  • positive regulation of T cell activation
  • positive regulation of phagocytosis
  • GO:0005886
  • GO:0016020
  • GO:0050766
  • GO:0050870
  • GPC
587123
7
  • fusion of virus membrane with host endosome membrane
  • host cell Golgi membrane
  • host cell endoplasmic reticulum membrane
  • host cell plasma membrane
  • membrane
  • metal ion binding
  • receptor-mediated endocytosis of virus by host cell
  • viral envelope
  • virion attachment to host cell
  • virion membrane
  • GO:0016020
  • GO:0019031
  • GO:0019062
  • GO:0019065
  • GO:0020002
  • GO:0039654
  • GO:0044167
  • GO:0044178
  • GO:0046872
  • GO:0055036
  • GPC
3052298
8
  • fusion of virus membrane with host endosome membrane
  • host cell Golgi membrane
  • host cell endoplasmic reticulum membrane
  • host cell plasma membrane
  • membrane
  • metal ion binding
  • receptor-mediated endocytosis of virus by host cell
  • viral envelope
  • virion attachment to host cell
  • virion membrane
  • GO:0016020
  • GO:0019031
  • GO:0019062
  • GO:0019065
  • GO:0020002
  • GO:0039654
  • GO:0044167
  • GO:0044178
  • GO:0046872
  • GO:0055036
  • ifnar1a
8022
3
  • plasma membrane
  • type I interferon-mediated signaling pathway
  • GO:0005886
  • GO:0060337
Displaying entries 69161 - 69170 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01