GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID Gene Symbol Species Taxonomy ID No. of Glycosylation Sites ▼ GO Labels GO IDs
  • Cacna1f
10090
1
  • detection of light stimulus involved in visual perception
  • metal ion binding
  • perikaryon
  • photoreceptor outer segment
  • regulation of monoatomic ion transmembrane transport
  • voltage-gated calcium channel activity
  • voltage-gated calcium channel complex
  • GO:0001750
  • GO:0005245
  • GO:0005891
  • GO:0034765
  • GO:0043204
  • GO:0046872
  • GO:0050908
  • SPAM1
9515
1
  • carbohydrate metabolic process
  • fusion of sperm to egg plasma membrane involved in single fertilization
  • hyalurononglucosaminidase activity
  • plasma membrane
  • GO:0004415
  • GO:0005886
  • GO:0005975
  • GO:0007342
  • N305_04790
328815
1
  • N-acetylgalactosamine-6-sulfatase activity
  • lysosome
  • GO:0005764
  • GO:0043890
  • M2
2044237
1
  • host cell plasma membrane
  • membrane
  • monoatomic ion channel activity
  • protein complex oligomerization
  • proton transmembrane transporter activity
  • suppression by virus of host autophagy
  • virion membrane
  • virus-mediated pore formation in host cell membrane
  • GO:0005216
  • GO:0015078
  • GO:0016020
  • GO:0020002
  • GO:0039521
  • GO:0039707
  • GO:0051259
  • GO:0055036
  • M2
1038277
1
  • host cell plasma membrane
  • membrane
  • monoatomic ion channel activity
  • protein complex oligomerization
  • proton transmembrane transporter activity
  • suppression by virus of host autophagy
  • virion membrane
  • virus-mediated pore formation in host cell membrane
  • GO:0005216
  • GO:0015078
  • GO:0016020
  • GO:0020002
  • GO:0039521
  • GO:0039707
  • GO:0051259
  • GO:0055036
  • BMS1
9606
1
  • 90S preribosome
  • ATP binding
  • GTP binding
  • GTPase activity
  • RNA binding
  • U3 snoRNA binding
  • chromosome
  • endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • nucleolus
  • nucleoplasm
  • ribosomal small subunit biogenesis
  • small-subunit processome
  • GO:0000462
  • GO:0000479
  • GO:0003723
  • GO:0003924
  • GO:0005524
  • GO:0005525
  • GO:0005654
  • GO:0005694
  • GO:0005730
  • GO:0030686
  • GO:0032040
  • GO:0034511
  • GO:0042274
  • NYPRO_LOCUS14879
34880
1
  • metal ion binding
  • regulation of monoatomic ion transmembrane transport
  • voltage-gated calcium channel activity
  • voltage-gated calcium channel complex
  • GO:0005245
  • GO:0005891
  • GO:0034765
  • GO:0046872
  • CACNA1D
62062
1
  • metal ion binding
  • regulation of monoatomic ion transmembrane transport
  • voltage-gated calcium channel activity
  • voltage-gated calcium channel complex
  • GO:0005245
  • GO:0005891
  • GO:0034765
  • GO:0046872
  • TNFAIP2
9606
1
  • SNARE binding
  • angiogenesis
  • cell differentiation
  • exocyst
  • exocyst localization
  • exocytosis
  • extracellular space
  • GO:0000145
  • GO:0000149
  • GO:0001525
  • GO:0005615
  • GO:0006887
  • GO:0030154
  • GO:0051601
  • M2
1004694
1
  • host cell plasma membrane
  • membrane
  • monoatomic ion channel activity
  • protein complex oligomerization
  • proton transmembrane transporter activity
  • suppression by virus of host autophagy
  • virion membrane
  • virus-mediated pore formation in host cell membrane
  • GO:0005216
  • GO:0015078
  • GO:0016020
  • GO:0020002
  • GO:0039521
  • GO:0039707
  • GO:0051259
  • GO:0055036
Displaying entries 69281 - 69290 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01