GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID Gene Symbol Species Taxonomy ID No. of Glycosylation Sites GO Labels GO IDs
  • famk-1
6239
2
  • ATP binding
  • Golgi membrane
  • extracellular region
  • manganese ion binding
  • protein phosphorylation
  • protein serine kinase activity
  • protein serine/threonine kinase activity
  • GO:0000139
  • GO:0004674
  • GO:0005524
  • GO:0005576
  • GO:0006468
  • GO:0030145
  • GO:0106310
  • Bves
10116
2
  • bicellular tight junction
  • cAMP binding
  • caveola
  • cell migration involved in heart development
  • cell projection membrane
  • epithelial cell-cell adhesion
  • heart development
  • hematopoietic progenitor cell differentiation
  • lateral plasma membrane
  • membrane
  • plasma membrane
  • positive regulation of locomotion
  • positive regulation of receptor recycling
  • regulation of GTPase activity
  • regulation of cell shape
  • regulation of endocytic recycling
  • regulation of heart rate
  • regulation of membrane potential
  • response to ischemia
  • sarcolemma
  • sinoatrial node cell development
  • skeletal muscle tissue development
  • striated muscle cell differentiation
  • structural molecule activity
  • substrate adhesion-dependent cell spreading
  • vesicle docking
  • vesicle-mediated transport
  • GO:0001921
  • GO:0002027
  • GO:0002244
  • GO:0002931
  • GO:0005198
  • GO:0005886
  • GO:0005901
  • GO:0005923
  • GO:0007507
  • GO:0007519
  • GO:0008360
  • GO:0016020
  • GO:0016192
  • GO:0016328
  • GO:0030552
  • GO:0031253
  • GO:0034446
  • GO:0040017
  • GO:0042383
  • GO:0042391
  • GO:0043087
  • GO:0048278
  • GO:0051146
  • GO:0060931
  • GO:0060973
  • GO:0090136
  • GO:2001135
  • LOC104953756
8208
2
  • G protein-coupled receptor activity
  • membrane
  • metal ion binding
  • photoreceptor activity
  • photoreceptor outer segment
  • phototransduction
  • visual perception
  • GO:0001750
  • GO:0004930
  • GO:0007601
  • GO:0007602
  • GO:0009881
  • GO:0016020
  • GO:0046872
  • IGnT2
9606
1
  • Golgi membrane
  • glycosyltransferase activity
  • GO:0000139
  • GO:0016757
  • Dana\GF21581
7217
1
  • calcium ion binding
  • regulation of monoatomic ion transmembrane transport
  • voltage-gated calcium channel activity
  • voltage-gated calcium channel complex
  • GO:0005245
  • GO:0005509
  • GO:0005891
  • GO:0034765
  • PLCD4B
704102
2
  • calcium ion binding
  • intracellular signal transduction
  • lipid catabolic process
  • phosphatidylinositol phospholipase C activity
  • GO:0004435
  • GO:0005509
  • GO:0016042
  • GO:0035556
  • LOC109011705
51240
1
  • apoplast
  • cell wall biogenesis
  • cell wall organization
  • hydrolase activity, hydrolyzing O-glycosyl compounds
  • xyloglucan metabolic process
  • xyloglucan:xyloglucosyl transferase activity
  • GO:0004553
  • GO:0010411
  • GO:0016762
  • GO:0042546
  • GO:0048046
  • GO:0071555
  • wnt1
7955
3
  • brain segmentation
  • canonical Wnt signaling pathway
  • cell fate commitment
  • cerebellum morphogenesis
  • cytokine activity
  • extracellular space
  • fourth ventricle development
  • frizzled binding
  • hindbrain development
  • midbrain-hindbrain boundary development
  • neuron differentiation
  • GO:0005109
  • GO:0005125
  • GO:0005615
  • GO:0021587
  • GO:0021592
  • GO:0030182
  • GO:0030902
  • GO:0030917
  • GO:0035284
  • GO:0045165
  • GO:0060070
  • cicH
227321
1
  • cichorine biosynthetic process
  • heme binding
  • iron ion binding
  • membrane
  • monooxygenase activity
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
  • secondary metabolite biosynthetic process
  • GO:0004497
  • GO:0005506
  • GO:0016020
  • GO:0016705
  • GO:0020037
  • GO:0044550
  • GO:0062032
  • LOC113110814
7957
1
  • metal ion binding
  • regulation of monoatomic ion transmembrane transport
  • voltage-gated calcium channel activity
  • voltage-gated calcium channel complex
  • GO:0005245
  • GO:0005891
  • GO:0034765
  • GO:0046872
Displaying entries 69301 - 69310 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01