GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID Gene Symbol Species Taxonomy ID No. of Glycosylation Sites GO Labels GO IDs
  • NFAM1
9606
1
  • B cell differentiation
  • B cell receptor signaling pathway
  • azurophil granule membrane
  • inflammatory response
  • intracellular signal transduction
  • membrane
  • membrane raft
  • plasma membrane
  • positive regulation of B cell receptor signaling pathway
  • positive regulation of DNA-binding transcription factor activity
  • positive regulation of cytokine production
  • regulation of B cell differentiation
  • signal transduction
  • transmembrane signaling receptor activity
  • GO:0001819
  • GO:0004888
  • GO:0005886
  • GO:0006954
  • GO:0007165
  • GO:0016020
  • GO:0030183
  • GO:0035556
  • GO:0035577
  • GO:0045121
  • GO:0045577
  • GO:0050853
  • GO:0050861
  • GO:0051091
  • B3gat2
34956
1
  • Golgi membrane
  • galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
  • metal ion binding
  • GO:0000139
  • GO:0015018
  • GO:0046872
  • M2
1425932
1
  • host cell plasma membrane
  • membrane
  • monoatomic ion channel activity
  • protein complex oligomerization
  • proton transmembrane transporter activity
  • suppression by virus of host autophagy
  • virion membrane
  • virus-mediated pore formation in host cell membrane
  • GO:0005216
  • GO:0015078
  • GO:0016020
  • GO:0020002
  • GO:0039521
  • GO:0039707
  • GO:0051259
  • GO:0055036
  • HLA-B
9606
1
  • ER to Golgi transport vesicle membrane
  • antigen processing and presentation
  • cell surface
  • early endosome membrane
  • immune response
  • lumenal side of endoplasmic reticulum membrane
  • phagocytic vesicle membrane
  • plasma membrane
  • recycling endosome membrane
  • GO:0005886
  • GO:0006955
  • GO:0009986
  • GO:0012507
  • GO:0019882
  • GO:0030670
  • GO:0031901
  • GO:0055038
  • GO:0098553
  • CACNA1A
9771
1
  • metal ion binding
  • regulation of monoatomic ion transmembrane transport
  • voltage-gated calcium channel activity
  • voltage-gated calcium channel complex
  • GO:0005245
  • GO:0005891
  • GO:0034765
  • GO:0046872
  • CLE13
3880
1
  • cell-cell signaling involved in cell fate commitment
  • extracellular space
  • GO:0005615
  • GO:0045168
  • AWP3b
284593
15
  • cell adhesion
  • cell adhesion mediator activity
  • extracellular region
  • fungal-type cell wall
  • GO:0005576
  • GO:0007155
  • GO:0009277
  • GO:0098631
  • GAUT8
3702
4
  • Golgi apparatus
  • Golgi membrane
  • Golgi trans cisterna
  • cell adhesion
  • endosome
  • glycosyltransferase activity
  • homogalacturonan biosynthetic process
  • mitochondrion
  • pectin biosynthetic process
  • polygalacturonate 4-alpha-galacturonosyltransferase activity
  • trans-Golgi network
  • GO:0000138
  • GO:0000139
  • GO:0005739
  • GO:0005768
  • GO:0005794
  • GO:0005802
  • GO:0007155
  • GO:0010289
  • GO:0016757
  • GO:0045489
  • GO:0047262
  • plcd1
375764
1
  • calcium ion binding
  • intracellular signal transduction
  • lipid catabolic process
  • phosphatidylinositol phospholipase C activity
  • GO:0004435
  • GO:0005509
  • GO:0016042
  • GO:0035556
  • M2
351257
1
  • host cell plasma membrane
  • membrane
  • monoatomic ion channel activity
  • protein complex oligomerization
  • proton transmembrane transporter activity
  • suppression by virus of host autophagy
  • virion membrane
  • virus-mediated pore formation in host cell membrane
  • GO:0005216
  • GO:0015078
  • GO:0016020
  • GO:0020002
  • GO:0039521
  • GO:0039707
  • GO:0051259
  • GO:0055036
Displaying entries 69311 - 69320 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01