GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	October 2, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	February 28, 2024 (Version 87)
UniProt	December 27, 2023

Protein Name	UniProt ID	Gene Symbol	Species	Taxonomy ID	No. of Glycosylation Sites	GO Labels	GO IDs
Xyloglucan endotransglucosylase/hydrolase	A0A4S8JI22	C4D60_Mb07t25950	Musa balbisiana	52838	1	apoplast cell wall biogenesis cell wall organization hydrolase activity, hydrolyzing O-glycosyl compounds xyloglucan metabolic process xyloglucan:xyloglucosyl transferase activity	GO:0004553 GO:0010411 GO:0016762 GO:0042546 GO:0048046 GO:0071555
Hemagglutinin-esterase	Q8V437	HE	Bovine respiratory coronavirus (strain 98TXSF-110-LUN)	233264	8	fusion of virus membrane with host plasma membrane host cell plasma membrane host cell surface receptor binding membrane sialate 4-O-acetylesterase activity sialate 9-O-acetylesterase activity sialate O-acetylesterase activity viral envelope virion membrane	GO:0001681 GO:0016020 GO:0019031 GO:0019064 GO:0020002 GO:0046789 GO:0055036 GO:0106330 GO:0106331
Retrotransposon hot spot (RHS) protein, putative (Fragment)	Q4DLB9	Tc00.1047053506595.149	Trypanosoma cruzi strain CL Brener	353153		membrane	GO:0016020
DNA-directed RNA polymerase II subunit RPB1	P16356	ama-1	Caenorhabditis elegans	6239		DNA binding DNA-directed 5'-3' RNA polymerase activity DNA-templated transcription RNA polymerase II, core complex chromosome embryo development ending in birth or egg hatching euchromatin gastrulation mRNA transcription by RNA polymerase II metal ion binding nuclear body nucleus transcription by RNA polymerase II	GO:0000791 GO:0003677 GO:0003899 GO:0005634 GO:0005665 GO:0005694 GO:0006351 GO:0006366 GO:0007369 GO:0009792 GO:0016604 GO:0042789 GO:0046872
Matrix protein 2	A0A1J0CUP9	M2	Influenza A virus (A/Rhode Island/10/2015(H3N2))	1916583	1	host cell plasma membrane membrane monoatomic ion channel activity protein complex oligomerization proton transmembrane transporter activity suppression by virus of host autophagy virion membrane virus-mediated pore formation in host cell membrane	GO:0005216 GO:0015078 GO:0016020 GO:0020002 GO:0039521 GO:0039707 GO:0051259 GO:0055036
Rhodopsin	O62795	RHO	Phoca groenlandica	39089	2	11-cis retinal binding G protein-coupled photoreceptor activity absorption of visible light membrane metal ion binding photoreceptor disc membrane photoreceptor inner segment membrane photoreceptor outer segment membrane plasma membrane rhodopsin mediated signaling pathway visual perception	GO:0005502 GO:0005886 GO:0007601 GO:0008020 GO:0016020 GO:0016038 GO:0016056 GO:0042622 GO:0046872 GO:0060342 GO:0097381
Zinc finger protein neuro-d4	Q92782	DPF1	Homo sapiens	9606		apoptotic process chromatin chromatin remodeling cytoplasm metal ion binding nBAF complex nervous system development positive regulation of cell differentiation positive regulation of double-strand break repair regulation of G0 to G1 transition regulation of G1/S transition of mitotic cell cycle regulation of mitotic metaphase/anaphase transition regulation of nucleotide-excision repair regulation of transcription by RNA polymerase II sequence-specific double-stranded DNA binding	GO:0000785 GO:0005737 GO:0006338 GO:0006357 GO:0006915 GO:0007399 GO:0030071 GO:0045597 GO:0046872 GO:0070316 GO:0071565 GO:1990837 GO:2000045 GO:2000781 GO:2000819
Sodium- and chloride-dependent betaine transporter	P48056	Slc6a12	Rattus norvegicus	10116	2	basolateral plasma membrane cellular hyperosmotic response gamma-aminobutyric acid transport gamma-aminobutyric acid:sodium:chloride symporter activity glycine betaine transport intracellular water homeostasis monocarboxylic acid transmembrane transporter activity monocarboxylic acid transport neurotransmitter transport plasma membrane response to organic substance sodium ion transmembrane transport	GO:0005332 GO:0005886 GO:0006836 GO:0008028 GO:0009992 GO:0010033 GO:0015718 GO:0015812 GO:0016323 GO:0031460 GO:0035725 GO:0071474
Laccase-13	P0DKK6	LAC13	Oryza sativa Japonica Group	39947	14	apoplast copper ion binding hydroquinone:oxygen oxidoreductase activity lignin catabolic process	GO:0005507 GO:0046274 GO:0048046 GO:0052716
Matrix protein 2	U5XEM3	M2	Influenza A virus (A/Virginia/16/2012(H3N2))	1416306	1	host cell plasma membrane membrane monoatomic ion channel activity protein complex oligomerization proton transmembrane transporter activity suppression by virus of host autophagy virion membrane virus-mediated pore formation in host cell membrane	GO:0005216 GO:0015078 GO:0016020 GO:0020002 GO:0039521 GO:0039707 GO:0051259 GO:0055036