MatrixDB is a freely available database focused on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides
| Source | Last Updated |
|---|---|
| MatrixDB | May 10, 2022 |
| Molecule ▲ | Molecule Name | Molecule Species | Partner | Partner Name | Partner Species |
|---|---|---|---|---|---|
| GAG_1 | Heparin | Q9JHZ9 | Slc38a3 | Rattus norvegicus | |
| GAG_1 | Heparin | Q9JI66 | Slc4a4 | Rattus norvegicus | |
| GAG_1 | Heparin | Q9Z0V5 | Prdx4 | Rattus norvegicus | |
| GAG_1 | Heparin | Q9Z2H4 | Lgr4 | Rattus norvegicus | |
| GAG_1 | Heparin | Q9Y215 | Colq | Homo sapiens | |
| GAG_1 | Heparin | P26435 | Slc10a1 | Rattus norvegicus | |
| GAG_1 | Heparin | Q05793 | Hspg2 | Mus musculus | |
| GAG_1 | Heparin | Q60675 | Lama2 | Mus musculus | |
| GAG_1 | Heparin | Q68FP1 | Gsn | Rattus norvegicus | |
| GAG_1 | Heparin | Q99068 | Lrpap1 | Rattus norvegicus | |
| GAG_1 | Heparin | Q63377 | Atp1b3 | Rattus norvegicus | |
| GAG_1 | Heparin | P05113 | IL5 | Homo sapiens | |
| GAG_1 | Heparin | P10039 | TNC | Gallus gallus | |
| GAG_1 | Heparin | P31044 | Pebp1 | Rattus norvegicus | |
| GAG_1 | Heparin | P14668 | Anxa5 | Rattus norvegicus | |
| GAG_1 | Heparin | P38983 | Rpsa | Rattus norvegicus | |
| GAG_1 | Heparin | SMALLMOL_2 | 1,3-dimethyl-2-[2-oxopropyl thio]imidazolium chloride | ||
| GAG_1 | Heparin | SPEP_1 | Boc-DON-Gln-Ile-Val-OMe | ||
| GAG_13 | HepMer_dp09_0001 | MULT_100_human | Heparanase Complex | Homo sapiens | |
| GAG_2 | Heparan sulfate | P02776 | PF4 | Homo sapiens | |
| GAG_2 | Heparan sulfate | P16092 | Fgfr1 | Mus musculus | |
| GAG_2 | Heparan sulfate | P01579 | IFNG | Homo sapiens | |
| GAG_2 | Heparan sulfate | P02649 | Apoe | Homo sapiens | |
| GAG_2 | Heparan sulfate | P07996 | Thbs1 | Homo sapiens | |
| GAG_2 | Heparan sulfate | P08253 | Mmp2 | Homo sapiens |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: December 8, 2025