MatrixDB is a freely available database focused on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides
| Source | Last Updated |
|---|---|
| MatrixDB | May 10, 2022 |
| Molecule ▼ | Molecule Name | Molecule Species | Partner | Partner Name | Partner Species |
|---|---|---|---|---|---|
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | P02766 | TTR | Homo sapiens |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | Q15113 | Pcolce | Homo sapiens |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | MULT_53_VAR1_human | Collagen_XXV | Homo sapiens |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | MULT_7_VAR1_bovine | Collagen-XI v1 | Bos taurus |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | PFRAG_13_human | Beta-amyloid peptide 1-40 | Homo sapiens |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | PFRAG_1_human | Endostatin | Homo sapiens |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | PFRAG_3_human | NC1-XVIII | Homo sapiens |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | GAG_1 | Heparin | |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | GAG_2 | Heparan sulfate | |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | GAG_3 | Dermatan Sulfate | |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | GAG_4 | Chondroitin Sulfate A | |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | GAG_9 | Hyaluronan | |
| PFRAG_10_human | PEX | Homo sapiens | P16035 | Timp2 | Homo sapiens |
| PFRAG_101_human | Lysyl oxidase propeptide | Homo sapiens | P12109 | Col6a1 | Homo sapiens |
| PFRAG_101_human | Lysyl oxidase propeptide | Homo sapiens | PFRAG_22_human | Anastellin | Homo sapiens |
| P98095 | Fbln2 | Homo sapiens | PFRAG_1_mouse | Endostatin | Mus musculus |
| P98095 | Fbln2 | Homo sapiens | PFRAG_2_mouse | Restin | Mus musculus |
| P98095 | Fbln2 | Homo sapiens | PFRAG_3_mouse | NC1-XVIII | Mus musculus |
| P98066 | Tnfaip6 | Homo sapiens | GAG_9 | Hyaluronan | |
| P97484 | Lilrb3 | Mus musculus | PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens |
| P97352 | S100a13 | Mus musculus | CAT_2 | Copper | |
| P80098 | Ccl7 | Homo sapiens | GAG_1 | Heparin | |
| P78333 | Gpc5 | Homo sapiens | PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens |
| P68104 | Eef1a1 | Homo sapiens | PFRAG_27_human | Serine protease HTRA2, mitochondrial | Homo sapiens |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
This work is licensed under Creative Commons Attribution 4.0 International
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Last updated: December 8, 2025