MatrixDB is a freely available database focused on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides
| Source | Last Updated |
|---|---|
| MatrixDB | May 10, 2022 |
| Molecule | Molecule Name | Molecule Species | Partner ▲ | Partner Name | Partner Species |
|---|---|---|---|---|---|
| SMALLMOL_1 | Hydroxylapatite | P13213 | SPARC | Bos taurus | |
| MULT_5_VAR3_human | Collagen-V homotrimer | Homo sapiens | P13497 | Bmp1 | Homo sapiens |
| PFRAG_6_human | Endorepellin | Homo sapiens | P13497 | Bmp1 | Homo sapiens |
| GAG_1 | Heparin | P13497 | Bmp1 | Homo sapiens | |
| MULT_3_human | Collagen-I | Homo sapiens | P13497-2 | Bmp1 | Homo sapiens |
| MULT_3_human | Collagen-I | Homo sapiens | P13497-4 | Bmp1 | Homo sapiens |
| P13591-1 | Ncam1 | Homo sapiens | P13591-1 | Ncam1 | Homo sapiens |
| GAG_1 | Heparin | P13599 | Fcgrt | Rattus norvegicus | |
| GAG_9 | Hyaluronan | P13611 | Vcan | Homo sapiens | |
| GAG_1 | Heparin | P13635 | CP | Rattus norvegicus | |
| PFRAG_67_human | Peptidyl-prolyl cis-trans isomerase B | Homo sapiens | P13667 | Pdia4 | Homo sapiens |
| GAG_1 | Heparin | P13721 | St6gal1 | Rattus norvegicus | |
| Q96RS6-2 | NUDCD1 | Homo sapiens | P13807-2 | Gys1 | Homo sapiens |
| MULT_3_rat | Collagen-I | Rattus norvegicus | P13839 | Ibsp | Rattus norvegicus |
| GAG_1 | Heparin | P14151 | Sell | Homo sapiens | |
| MULT_1_human | Laminin-111 | Homo sapiens | P14210 | Hgf | Homo sapiens |
| MULT_3_human | Collagen-I | Homo sapiens | P14210 | Hgf | Homo sapiens |
| MULT_4_VAR1_human | Collagen-IV v1 | Homo sapiens | P14210 | Hgf | Homo sapiens |
| MULT_57_human | Thrombospondin-1 | Homo sapiens | P14210 | Hgf | Homo sapiens |
| GAG_1 | Heparin | P14210 | Hgf | Homo sapiens | |
| GAG_2 | Heparan sulfate | P14210 | Hgf | Homo sapiens | |
| GAG_4 | Chondroitin Sulfate A | P14210 | Hgf | Homo sapiens | |
| P14210-6 | Hgf | Homo sapiens | P14210-6 | Hgf | Homo sapiens |
| GAG_1 | Heparin | P14210-6 | Hgf | Homo sapiens | |
| PFRAG_95_mouse | CTF1-alpha | Mus musculus | P14211 | Calr | Mus musculus |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: December 8, 2025