MatrixDB is a freely available database focused on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides
| Source | Last Updated |
|---|---|
| MatrixDB | May 10, 2022 |
| Molecule ▲ | Molecule Name | Molecule Species | Partner | Partner Name | Partner Species |
|---|---|---|---|---|---|
| P52298-1 | NCBP2 | Homo sapiens | Q14974-1 | Kpnb1 | Homo sapiens |
| P53420 | Col4a4 | Homo sapiens | MULT_16_human | Integrin-alphavbeta3 | Homo sapiens |
| P53990-4 | Ist1 | Homo sapiens | P53990-4 | Ist1 | Homo sapiens |
| P54252-1 | Atxn3 | Homo sapiens | P54252-1 | Atxn3 | Homo sapiens |
| P54830-1 | Ptpn5 | Mus musculus | Q16539-1 | Mapk14 | Homo sapiens |
| P56199 | Itga1 | Homo sapiens | MULT_10_human | Collagen-III | Homo sapiens |
| P56199 | Itga1 | Homo sapiens | MULT_12_human | Collagen-XIII | Homo sapiens |
| P56199 | Itga1 | Homo sapiens | MULT_3_rat | Collagen-I | Rattus norvegicus |
| P56199 | Itga1 | Homo sapiens | MULT_5_VAR1_human | Collagen-V heterotrimer 2 different chains | Homo sapiens |
| P56199 | Itga1 | Homo sapiens | MULT_9_bovine | Collagen-II | Bos taurus |
| P56199 | Itga1 | Homo sapiens | MULT_9_chick | Collagen-II | Gallus gallus |
| P57796-1 | CABP4 | Homo sapiens | O60840-1 | Cacna1f | Homo sapiens |
| P57796-1 | CABP4 | Homo sapiens | O60840-5 | Cacna1f | Homo sapiens |
| P57796-2 | CABP4 | Homo sapiens | Q08117-2 | Aes | Homo sapiens |
| P58215 | Loxl3 | Homo sapiens | PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens |
| P60484-1 | Pten | Homo sapiens | P60484-1 | Pten | Homo sapiens |
| P61073 | CXCR4 | Homo sapiens | PFRAG_25_HIV1 | Surface protein gp120 | Human immunodeficiency virus type 1 group M subtype B |
| P63277-1 | Amelx | Mus musculus | P63277-1 | Amelx | Mus musculus |
| P68104 | Eef1a1 | Homo sapiens | PFRAG_27_human | Serine protease HTRA2, mitochondrial | Homo sapiens |
| P78333 | Gpc5 | Homo sapiens | PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens |
| P80098 | Ccl7 | Homo sapiens | GAG_1 | Heparin | |
| P97352 | S100a13 | Mus musculus | CAT_2 | Copper | |
| P97484 | Lilrb3 | Mus musculus | PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens |
| P98066 | Tnfaip6 | Homo sapiens | GAG_9 | Hyaluronan | |
| P98095 | Fbln2 | Homo sapiens | PFRAG_1_mouse | Endostatin | Mus musculus |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: December 8, 2025