MatrixDB is a freely available database focused on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides
| Source | Last Updated |
|---|---|
| MatrixDB | May 10, 2022 |
| Molecule | Molecule Name | Molecule Species | Partner ▲ | Partner Name | Partner Species |
|---|---|---|---|---|---|
| P02649 | Apoe | Homo sapiens | PFRAG_13_human | Beta-amyloid peptide 1-40 | Homo sapiens |
| P04156 | Prnp | Homo sapiens | PFRAG_13_human | Beta-amyloid peptide 1-40 | Homo sapiens |
| P08138 | Ngfr | Homo sapiens | PFRAG_13_human | Beta-amyloid peptide 1-40 | Homo sapiens |
| P10909 | CLU | Homo sapiens | PFRAG_13_human | Beta-amyloid peptide 1-40 | Homo sapiens |
| MULT_53_VAR3_human | Collagen_XXV | Homo sapiens | PFRAG_13_human | Beta-amyloid peptide 1-40 | Homo sapiens |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | PFRAG_13_human | Beta-amyloid peptide 1-40 | Homo sapiens |
| PFRAG_13_human | Beta-amyloid peptide 1-40 | Homo sapiens | PFRAG_13_human | Beta-amyloid peptide 1-40 | Homo sapiens |
| Q5JRX3 | PITRM1 | Homo sapiens | PFRAG_13_human | Beta-amyloid peptide 1-40 | Homo sapiens |
| GAG_1 | Heparin | PFRAG_14_human | HepV | Homo sapiens | |
| GAG_2 | Heparan sulfate | PFRAG_14_human | HepV | Homo sapiens | |
| P17948-2 | Flt1 | Homo sapiens | PFRAG_16_human | LG3 | Homo sapiens |
| P07214 | SPARC | Mus musculus | PFRAG_1_human | Endostatin | Homo sapiens |
| P21809 | BGN | Bos taurus | PFRAG_1_human | Endostatin | Homo sapiens |
| P07996 | Thbs1 | Homo sapiens | PFRAG_1_human | Endostatin | Homo sapiens |
| P09493 | TPM1 | Homo sapiens | PFRAG_1_human | Endostatin | Homo sapiens |
| P14780 | Mmp9 | Homo sapiens | PFRAG_1_human | Endostatin | Homo sapiens |
| P19338 | NCL | Homo sapiens | PFRAG_1_human | Endostatin | Homo sapiens |
| P21980 | Tgm2 | Homo sapiens | PFRAG_1_human | Endostatin | Homo sapiens |
| Q15113 | Pcolce | Homo sapiens | PFRAG_1_human | Endostatin | Homo sapiens |
| MULT_15_human | Integrin-alpha5beta1 | Homo sapiens | PFRAG_1_human | Endostatin | Homo sapiens |
| MULT_16_human | Integrin-alphavbeta3 | Homo sapiens | PFRAG_1_human | Endostatin | Homo sapiens |
| MULT_17_human | Integrin-alphavbeta5 | Homo sapiens | PFRAG_1_human | Endostatin | Homo sapiens |
| MULT_1_human | Laminin-111 | Homo sapiens | PFRAG_1_human | Endostatin | Homo sapiens |
| MULT_1_mouse | Laminin-111 | Mus musculus | PFRAG_1_human | Endostatin | Homo sapiens |
| MULT_3_human | Collagen-I | Homo sapiens | PFRAG_1_human | Endostatin | Homo sapiens |
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
This work is licensed under Creative Commons Attribution 4.0 International
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Last updated: December 8, 2025