MatrixDB is a freely available database focused on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides
| Source | Last Updated |
|---|---|
| MatrixDB | May 10, 2022 |
| Molecule | Molecule Name | Molecule Species | Partner | Partner Name ▲ | Partner Species |
|---|---|---|---|---|---|
| Q96JN8-2 | Neurl4 | Homo sapiens | Q8N490-2 | Pnkd | Homo sapiens |
| O75521-2 | Eci2 | Homo sapiens | Q8WVV4-1 | Pof1b | Homo sapiens |
| GAG_1 | Heparin | P55159 | Pon1 | Rattus norvegicus | |
| GAG_1 | Heparin | Q6AXM8 | Pon2 | Rattus norvegicus | |
| GAG_1 | Heparin | Q68FP2 | Pon3 | Rattus norvegicus | |
| Q13557-8 | camk2d | Homo sapiens | Q86W92-2 | Ppfibp1 | Homo sapiens |
| Q96RS6-2 | NUDCD1 | Homo sapiens | Q08209-2 | Ppp3ca | Homo sapiens |
| GAG_1 | Heparin | Q9Z0V5 | Prdx4 | Rattus norvegicus | |
| GAG_1 | Heparin | P51888 | Prelp | Homo sapiens | |
| GAG_1 | Heparin | Q9EQP5 | Prelp | Rattus norvegicus | |
| GAG_1 | Heparin | Q9GKN8 | Prelp | Bos taurus | |
| GAG_2 | Heparan sulfate | Q9GKN8 | Prelp | Bos taurus | |
| PFRAG_52_human | Insulin receptor subunit beta | Homo sapiens | P54646 | Prkaa2 | Homo sapiens |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | P04156 | Prnp | Homo sapiens |
| GAG_1 | Heparin | Q6AXX6 | Prxl2a | Rattus norvegicus | |
| GAG_1 | Heparin | P97887 | Psen1 | Rattus norvegicus | |
| Q9NYA1-2 | Sphk1 | Homo sapiens | Q8TAA3-2 | Psma8 | Homo sapiens |
| Q05086-1 | Ube3a | Homo sapiens | Q96EY7-2 | Ptcd3 | Homo sapiens |
| P60484-1 | Pten | Homo sapiens | P60484-1 | Pten | Homo sapiens |
| GAG_1 | Heparin | P63090 | Ptn | Rattus norvegicus | |
| Q96JN8-2 | Neurl4 | Homo sapiens | Q12923-2 | Ptpn13 | Homo sapiens |
| Q16539-1 | Mapk14 | Homo sapiens | P54830-1 | Ptpn5 | Mus musculus |
| GAG_1 | Heparin | P04157 | Ptprc | Rattus norvegicus | |
| MULT_82_human | Complement 1Q | Homo sapiens | P26022 | Ptx3 | Homo sapiens |
| PFRAG_95_mouse | CTF1-alpha | Mus musculus | P61027 | RAB10 | Mus musculus |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: December 8, 2025