Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1786476 - 1786500 of 1794267 in total
CAZy Enzyme Classes CAZy Family ▲ GenBank Protein Name Gene ID MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Polysaccharide Lyases (PLs) PL3_1 CAO95587.1 pectate lyase eta:ETA_RS03805 Erwinia tasmaniensis Et1/99 88.8143 100.0 776.933
Polysaccharide Lyases (PLs) PL3_1 BAG24117.1 pectate lyase pci:BH81_RS09450 Pseudomonas cichorii JBC1 98.6301 39.03 437.187
Polysaccharide Lyases (PLs) PL3_1 ACM60942.1 pectate lyase ate:ATHE_RS09310 Caldicellulosiruptor bescii DSM 6725 89.1304 100.0 802.357
Polysaccharide Lyases (PLs) PL3_1 CUV17520.1 Pectate lyase rse:F504_RS13185 Ralstonia pseudosolanacearum FQY_4 86.8421 100.0 659.062
Polysaccharide Lyases (PLs) PL3_1 AEM73874.1 pectate lyase clc:CALLA_RS06330 Caldicellulosiruptor acetigenus 6A 90.3803 100.0 783.482
Polysaccharide Lyases (PLs) PL3_1 CCA81546.1 Pectate lyase rsl:RPSI07_0735 Ralstonia solanacearum PSI07 88.5638 100.0 665.996
Polysaccharide Lyases (PLs) PL3_1 CCA85058.1 Pectate lyase gm06394:LBM2029_03265 Ralstonia solanacearum 86.9333 100.0 654.44
Polysaccharide Lyases (PLs) PL3_1 CBY65963.1 Pectate lyase (Fragment) gm05172:IYO_RS06745 Pseudomonas syringae pv. actinidiae ICMP 18884 77.0677 100.0 387.497
Polysaccharide Lyases (PLs) PL3_1 CBY65964.1 Pectate lyase (Fragment) gm05172:IYO_RS06745 Pseudomonas syringae pv. actinidiae ICMP 18884 83.4688 100.0 589.726
Polysaccharide Lyases (PLs) PL3_1 CBY65965.1 Pectate lyase (Fragment) gm05172:IYO_RS06745 Pseudomonas syringae pv. actinidiae ICMP 18884 71.7842 100.0 322.398
Polysaccharide Lyases (PLs) PL3_1 CBY65966.1 Pectate lyase (Fragment) pst:PSPTO_1373 Pseudomonas syringae pv. tomato str. DC3000 80.9264 100.0 566.229
Polysaccharide Lyases (PLs) PL3_1 CBY65967.1 Pectate lyase (Fragment) gm05172:IYO_RS06745 Pseudomonas syringae pv. actinidiae ICMP 18884 78.3198 100.0 542.732
Polysaccharide Lyases (PLs) PL3_1 CBY65968.1 Pectate lyase (Fragment) gm05172:IYO_RS06745 Pseudomonas syringae pv. actinidiae ICMP 18884 77.8689 100.0 535.798
Polysaccharide Lyases (PLs) PL3_1 BAE80274.1 HrpW aaa:ACAV_RS02545 Paracidovorax avenae ATCC 19860 78.7053 100.0 861.292
Polysaccharide Lyases (PLs) PL3_1 BAE80242.1 HrpW aaa:ACAV_RS02545 Paracidovorax avenae ATCC 19860 77.6271 100.0 850.506
Polysaccharide Lyases (PLs) PL3_1 AGP38325.1 Pectate lyase scu:SCE1572_RS30915 Sorangium cellulosum So0157-2 94.6381 100.0 686.411
Polysaccharide Lyases (PLs) PL3_1 AGP42009.1 pectate lyase scu:SCE1572_RS51815 Sorangium cellulosum So0157-2 87.9012 100.0 688.723
Polysaccharide Lyases (PLs) PL3_1 SOS16702.1 Type III helper protein HrpW1 gm04502:PSYRH_RS19950 Pseudomonas syringae pv. syringae HS191 81.982 100.0 693.345
Polysaccharide Lyases (PLs) PL3_1 SOS32688.1 Type III helper protein HrpW1 pst:PSPTO_1373 Pseudomonas syringae pv. tomato str. DC3000 78.9954 100.0 660.218
Polysaccharide Lyases (PLs) PL3_1 SOS41123.1 Type III helper protein HrpW1 psp:PSPPH_RS06390 Pseudomonas syringae 89.8795 100.0 719.924
Polysaccharide Lyases (PLs) PL3_1 AUX38879.1 Pectate lyase scl:SCE_RS25345 Sorangium cellulosum 73.913 100.0 556.984
Polysaccharide Lyases (PLs) PL3_1 AUX42355.1 pectate lyase scu:SCE1572_RS30915 Sorangium cellulosum So0157-2 76.5586 100.0 600.512
Polysaccharide Lyases (PLs) PL3_1 AUX46975.1 pectate lyase scu:SCE1572_RS51815 Sorangium cellulosum So0157-2 77.2397 100.0 620.542
Polysaccharide Lyases (PLs) PL3_1 AZK47440.1 Pectate lyase gm06219:A3958_RS15055 Paenibacillus glucanolyticus 78.5714 100.0 353.984
Polysaccharide Lyases (PLs) PL3_1 AAX58441.1 Harpin HrpZ pci:BH81_RS09450 Pseudomonas cichorii JBC1 88.0184 38.4 397.512
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024