Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1786901 - 1786925 of 1794267 in total
CAZy Enzyme Classes ▲ CAZy Family GenBank Protein Name Gene ID MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Polysaccharide Lyases (PLs) PL3_4 AOS64950.1 Pectate lyase tbi:TBIS_RS04085 Thermobispora bispora DSM 43833 56.5789 83.51 268.47
Polysaccharide Lyases (PLs) PL3_4 CUM41551.1 gm05527:BN2537_RS27900 Streptomyces venezuelae 98.155 100.0 541.962
Polysaccharide Lyases (PLs) PL3_4 CUM41551.1 gm05595:AQF52_RS12285 Streptomyces venezuelae 98.155 100.0 541.962
Polysaccharide Lyases (PLs) PL3_4 AVH97648.1 gm05527:BN2537_RS27900 Streptomyces venezuelae 76.8382 99.63 440.269
Polysaccharide Lyases (PLs) PL3_4 AVH97648.1 gm05595:AQF52_RS12285 Streptomyces venezuelae 76.8382 99.63 440.269
Polysaccharide Lyases (PLs) PL3_4 ATO79700.1 ase:ACPL_RS01460 Actinoplanes sp. SE50/110 83.1967 100.0 790.03
Polysaccharide Lyases (PLs) PL3_4 AXX29964.1 ami:AMIR_RS12860 Actinosynnema mirum DSM 43827 94.7368 100.0 516.538
Polysaccharide Lyases (PLs) PL3_4 AVT28313.1 ams:AMIS_RS35195 Actinoplanes missouriensis 431 56.7308 98.81 465.692
Polysaccharide Lyases (PLs) PL3_4 AGJ54244.1 sfa:SFLA_RS24570 Streptomyces pratensis ATCC 33331 90.9747 100.0 510.375
Polysaccharide Lyases (PLs) PL3_5 AOR57694.1 pec:W5S_RS16120 Pectobacterium parmentieri 94.5245 100.0 668.692
Polysaccharide Lyases (PLs) PL3_5 AOR64362.1 pec:W5S_RS16120 Pectobacterium parmentieri 95.389 100.0 683.33
Polysaccharide Lyases (PLs) PL3_5 AOR57694.1 pwa:PECWA_RS16295 Pectobacterium parmentieri WPP163 94.5245 100.0 668.692
Polysaccharide Lyases (PLs) PL3_5 AOR64362.1 pwa:PECWA_RS16295 Pectobacterium parmentieri WPP163 95.389 100.0 683.33
Polysaccharide Lyases (PLs) PL3_4 APU22866.1 fre:FRANEAN1_RS11290 Frankia sp. 55.5066 85.66 262.692
Polysaccharide Lyases (PLs) PL3_4 ABW11736.1 fre:FRANEAN1_RS11290 Frankia sp. 78.6301 100.0 573.163
Polysaccharide Lyases (PLs) PL3_4 ANB05001.1 gm06223:SAM40697_RS05250 Streptomyces ambofaciens 96.2547 100.0 526.168
Polysaccharide Lyases (PLs) PL3_4 AGJ54244.1 strp:F750_RS07890 Streptomyces sp. 90.9747 100.0 510.375
Polysaccharide Lyases (PLs) PL3_5 ASY76280.1 eca:ECA_RS05425 Pectobacterium carotovorum 95.1009 100.0 681.404
Polysaccharide Lyases (PLs) PL3_5 AZK61852.1 eca:ECA_RS05425 Pectobacterium carotovorum 93.6599 100.0 672.93
Polysaccharide Lyases (PLs) PL3_5 ASY78499.1 eca:ECA_RS05425 Pectobacterium carotovorum 92.7954 100.0 665.996
Polysaccharide Lyases (PLs) PL3_5 AIA70057.1 eca:ECA_RS05425 Pectobacterium carotovorum 97.6945 100.0 698.353
Polysaccharide Lyases (PLs) PL3_4 QDN77224.1 sma:SAP1_RS32915 Streptomyces avermitilis MA-4680 = NBRC 14893 79.0875 95.28 435.261
Polysaccharide Lyases (PLs) PL3_4 QDO39325.1 sma:SAP1_RS32915 Streptomyces avermitilis MA-4680 = NBRC 14893 78.7072 95.28 432.95
Polysaccharide Lyases (PLs) PL3_5 AZZ90285.1 hch:HCH_RS03765 Hahella chejuensis KCTC 2396 79.669 100.0 704.516
Polysaccharide Lyases (PLs) PL3_5 ASY76280.1 patr:EV46_RS05415 Pectobacterium atrosepticum 95.1009 100.0 681.404
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024