Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1786951 - 1786975 of 1794267 in total
CAZy Enzyme Classes CAZy Family ▲ GenBank Protein Name Gene ID MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Polysaccharide Lyases (PLs) PL3_5 ANE74305.1 gm05056:DSOMK16_RS0114685 Dickeya solani MK16 98.8439 100.0 702.975
Polysaccharide Lyases (PLs) PL3_5 AUC41523.1 gm05056:DSOMK16_RS0114685 Dickeya solani MK16 98.8439 100.0 702.975
Polysaccharide Lyases (PLs) PL3_5 ATO34005.1 gm05092:DDIIPO980_RS14825 Dickeya dianthicola IPO 980 98.8439 100.0 704.516
Polysaccharide Lyases (PLs) PL3_5 ANE74305.1 gm05067:DSOIPO2222_RS14355 Dickeya solani IPO 2222 98.8439 100.0 702.975
Polysaccharide Lyases (PLs) PL3_5 AUC41523.1 gm05067:DSOIPO2222_RS14355 Dickeya solani IPO 2222 98.8439 100.0 702.975
Polysaccharide Lyases (PLs) PL3_5 ATO34005.1 gm05057:DDIGBBC2039_RS0114920 Dickeya dianthicola GBBC 2039 98.8439 100.0 704.516
Polysaccharide Lyases (PLs) PL3_5 ANE74305.1 gm05065:DSOGBBC2040_RS14705 Dickeya solani GBBC 2040 98.8439 100.0 702.975
Polysaccharide Lyases (PLs) PL3_5 AUC41523.1 gm05065:DSOGBBC2040_RS14705 Dickeya solani GBBC 2040 98.8439 100.0 702.975
Polysaccharide Lyases (PLs) PL3_5 ATV43683.1 pcc:PCC21_RS05090 Pectobacterium carotovorum subsp. carotovorum PCC21 94.8127 100.0 675.241
Polysaccharide Lyases (PLs) PL3_5 APS29100.1 pcc:PCC21_RS05090 Pectobacterium carotovorum subsp. carotovorum PCC21 95.1009 100.0 674.47
Polysaccharide Lyases (PLs) PL3_5 AZK61852.1 pcc:PCC21_RS05090 Pectobacterium carotovorum subsp. carotovorum PCC21 93.9481 100.0 672.93
Polysaccharide Lyases (PLs) PL3_5 ABA02177.1 Pectate lyase cja:ST2966 Cellvibrio japonicus Ueda107 67.0984 100.0 534.258
Polysaccharide Lyases (PLs) PL3_5 ABD80963.1 Pectate lyase sde:SDE_RS08910 Saccharophagus degradans 2-40 98.9796 100.0 801.201
Polysaccharide Lyases (PLs) PL3_5 AWB69149.1 Pectate lyase sde:SDE_RS08910 Saccharophagus degradans 2-40 75.5102 100.0 631.328
Polysaccharide Lyases (PLs) PL4 AEE34344.1 Galactose-binding protein 842828 ath:AT1G65210 Arabidopsis thaliana 100.0 100.0 518.079
Polysaccharide Lyases (PLs) PL4 AFA41489.1 rhamnogalacturonan endolyase ath:AT1G09910 Arabidopsis thaliana 53.2695 97.36 689.493
Polysaccharide Lyases (PLs) PL4 AFA41490.1 rhamnogalacturonan endolyase ath:AT2G22620-2 Arabidopsis thaliana 57.3693 99.21 758.059
Polysaccharide Lyases (PLs) PL4 AFA41492.1 Putative lyase ath:AT1G09890 Arabidopsis thaliana 47.2222 75.31 331.257
Polysaccharide Lyases (PLs) PL4 AFA41491.1 rhamnogalacturonan endolyase ath:AT2G22620-2 Arabidopsis thaliana 55.5556 86.41 533.487
Polysaccharide Lyases (PLs) PL4 SDS59671.1 rhamnogalacturonan endolyase pmq:PM3016_RS21700 Paenibacillus mucilaginosus 3016 45.2303 68.85 508.064
Polysaccharide Lyases (PLs) PL4 BAK22178.1 Rhamnogalacturonate lyase, rhamnogalacturonase mps:ST1195 Melissococcus plutonius ATCC 35311 100.0 100.0 276.944
Polysaccharide Lyases (PLs) PL4 AEI43530.1 rhamnogalacturonan endolyase pms:KNP414_RS22645 Paenibacillus mucilaginosus KNP414 95.1807 100.0 1296.18
Polysaccharide Lyases (PLs) PL4 QCD81960.1 rhamnogalacturonan endolyase ath:AT2G22620-2 Arabidopsis thaliana 59.3272 52.86 775.007
Polysaccharide Lyases (PLs) PL4 QCD90738.1 rhamnogalacturonan endolyase ath:AT2G22620-2 Arabidopsis thaliana 56.4516 34.06 725.702
Polysaccharide Lyases (PLs) PL4 BBH07101.1 Rhamnogalacturonate lyase family protein ath:AT2G22620-2 Arabidopsis thaliana 50.6757 93.81 582.793
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024