Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1787001 - 1787025 of 1794267 in total
CAZy Enzyme Classes ▲ CAZy Family GenBank Protein Name Gene ID MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Polysaccharide Lyases (PLs) PL4_1 BBH65879.1 rhamnogalacturonan endolyase ams:AMIS_RS02480 Actinoplanes missouriensis 431 88.2022 100.0 930.243
Polysaccharide Lyases (PLs) PL4_1 VBB79716.1 Rhamnogalacturonate lyase mtm:MYCTH_51766 Thermothelomyces thermophilus ATCC 42464 81.378 99.81 901.353
Polysaccharide Lyases (PLs) PL4 BBH93641.1 rhamnogalacturonan endolyase afm:AFUA_8G00820 Aspergillus fumigatus Af293 39.5264 76.03 373.244
Polysaccharide Lyases (PLs) PL4_1 AAA64368.1 Rhamnogalacturonate lyase A ang:ANI_1_190124 Aspergillus niger CBS 513.88 85.9048 99.62 931.398
Polysaccharide Lyases (PLs) PL4_1 CAK46452.1 Probable rhamnogalacturonate lyase A ang:ANI_1_190124 Aspergillus niger CBS 513.88 97.1264 97.93 1027.31
Polysaccharide Lyases (PLs) PL4_1 CAD36194.1 Rhamnogalacturonate lyase A (Fragment) ang:ANI_1_190124 Aspergillus niger CBS 513.88 97.2 100.0 983.015
Polysaccharide Lyases (PLs) PL4_1 ADB23409.1 Rhamnogalacturonate lyase ang:ANI_1_190124 Aspergillus niger CBS 513.88 60.1547 96.99 629.402
Polysaccharide Lyases (PLs) PL4_1 BAL85709.1 rhamnogalacturonan endolyase ams:AMIS_RS02480 Actinoplanes missouriensis 431 95.8801 100.0 1011.52
Polysaccharide Lyases (PLs) PL4_1 BAM14847.1 Rhamnogalacturonate lyase aor:AOR_1_590054 Aspergillus oryzae RIB40 96.7803 100.0 1040.02
Polysaccharide Lyases (PLs) PL4_1 BAC69819.1 rhamnogalacturonan endolyase sma:SAP1_RS11115 Streptomyces avermitilis MA-4680 = NBRC 14893 92.6523 100.0 1038.87
Polysaccharide Lyases (PLs) PL4 AAM42648.1 Truncated rhamnogalacturonase B xcc:XCC3378 Xanthomonas campestris 97.8571 100.0 276.559
Polysaccharide Lyases (PLs) PL4 AAM42648.1 Truncated rhamnogalacturonase B xcb:ST179 Xanthomonas campestris 97.8571 100.0 276.559
Polysaccharide Lyases (PLs) PL4_1 ATB38823.1 rhamnogalacturonan endolyase ote:OTER_RS11180 Opitutus terrae PB90-1 53.2588 100.0 538.88
Polysaccharide Lyases (PLs) PL4_1 AXG76381.1 rhamnogalacturonan endolyase gm05527:BN2537_RS06875 Streptomyces venezuelae 73.3716 90.46 802.742
Polysaccharide Lyases (PLs) PL4_1 AXG76381.1 rhamnogalacturonan endolyase gm05595:AQF52_RS33275 Streptomyces venezuelae 73.3716 90.46 802.742
Polysaccharide Lyases (PLs) PL4_1 AEO43649.1 xax:XACM_RS16700 Xanthomonas axonopodis 99.0619 100.0 1048.5
Polysaccharide Lyases (PLs) PL4_1 AQS77767.1 xax:XACM_RS16700 Xanthomonas axonopodis 98.3114 100.0 1043.49
Polysaccharide Lyases (PLs) PL4_1 AKM27429.1 xac:XAC_RS17735 Xanthomonas axonopodis 100.0 100.0 1079.7
Polysaccharide Lyases (PLs) PL4_1 AJY92478.1 xac:XAC_RS17735 Xanthomonas axonopodis 100.0 100.0 1112.83
Polysaccharide Lyases (PLs) PL4_1 ARR15150.1 xac:XAC_RS17735 Xanthomonas axonopodis 100.0 100.0 1079.7
Polysaccharide Lyases (PLs) PL4_1 ALO12294.1 gm05527:BN2537_RS06875 Streptomyces venezuelae 94.0754 100.0 1072.77
Polysaccharide Lyases (PLs) PL4_1 ALO12294.1 gm05595:AQF52_RS33275 Streptomyces venezuelae 94.0754 100.0 1072.77
Polysaccharide Lyases (PLs) PL4_1 ANA36184.1 gm06214:VZ52_RS17680 Ralstonia mannitolilytica 99.8092 95.27 1090.87
Polysaccharide Lyases (PLs) PL4_1 ATG22491.1 gm06214:VZ52_RS17680 Ralstonia mannitolilytica 98.0916 87.47 1073.54
Polysaccharide Lyases (PLs) PL4_1 AVQ09187.1 gm04731:ACU15_RS03960 Xanthomonas oryzae pv. oryzicola 87.0544 100.0 919.842
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024