Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1787351 - 1787375 of 1794267 in total
CAZy Enzyme Classes CAZy Family ▲ GenBank Protein Name Gene ID MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Polysaccharide Lyases (PLs) PL5 AEF23846.1 Poly(Beta-D-mannuronate) lyase pfv:PSEFU_RS19475 Pseudomonas fulva 12-X 97.8261 100.0 722.235
Polysaccharide Lyases (PLs) PL5 AEU36899.1 Poly(Beta-D-mannuronate) lyase gma:ACIX8_RS12870 Granulicella mallensis MP5ACTX8 96.1326 100.0 709.138
Polysaccharide Lyases (PLs) PL5 AAW59357.1 Alginate lyase (Fragment) pst:PSPTO_1236 Pseudomonas syringae pv. tomato str. DC3000 80.0 100.0 173.326
Polysaccharide Lyases (PLs) PL5 AAW59357.1 Alginate lyase (Fragment) gm05024:PCHL3084_RS05780 Pseudomonas chlororaphis subsp. aureofaciens 30-84 79.0 100.0 173.326
Polysaccharide Lyases (PLs) PL5 AHM03576.1 Alginate lyase red:ROSELON_RS05545 Roseibacterium elongatum DSM 19469 100.0 89.08 712.22
Polysaccharide Lyases (PLs) PL5 AKI62663.1 gm04435:XM39_RS20620 Pandoraea apista 97.929 100.0 681.404
Polysaccharide Lyases (PLs) PL5 AJE99968.1 gm04433:AA956_RS13935 Pandoraea apista 97.929 100.0 681.404
Polysaccharide Lyases (PLs) PL5 AJE99968.1 gm04435:XM39_RS20620 Pandoraea apista 97.929 100.0 681.404
Polysaccharide Lyases (PLs) PL5 AMO99143.1 gm06028:CATER10_RS05870 Collimonas arenae 99.0596 100.0 645.58
Polysaccharide Lyases (PLs) PL5 AMO99143.1 gm06030:CATER282_RS05790 Collimonas arenae 99.0596 100.0 645.58
Polysaccharide Lyases (PLs) PL5 AMP12429.1 gm06031:CPTER291_RS00640 Collimonas pratensis 97.2561 100.0 646.351
Polysaccharide Lyases (PLs) PL5 ALX16800.1 gm05176:P350_RS34770 Burkholderia cepacia JBK9 97.4843 100.0 628.246
Polysaccharide Lyases (PLs) PL5 AHJ73924.1 ksa:C813_RS03310 Kosakonia sacchari SP1 100.0 100.0 738.028
Polysaccharide Lyases (PLs) PL5 SDU35040.1 Poly(Beta-D-mannuronate) lyase pmy:PMEN_RS08365 Pseudomonas mendocina ymp 50.4178 97.28 350.132
Polysaccharide Lyases (PLs) PL5 SDU35016.1 Poly(Beta-D-mannuronate) lyase pmy:PMEN_RS08365 Pseudomonas mendocina ymp 51.8519 94.86 361.303
Polysaccharide Lyases (PLs) PL5 SDU82925.1 Poly(Beta-D-mannuronate) lyase pmy:PMEN_RS08365 Pseudomonas mendocina ymp 86.5229 100.0 641.343
Polysaccharide Lyases (PLs) PL5 APT56716.1 Alginate lyase domain-containing protein gm04617:DP16_RS14785 Stenotrophomonas maltophilia 30.6061 86.84 142.124
Polysaccharide Lyases (PLs) PL5 APT56716.1 Alginate lyase domain-containing protein gm05052:EPM1_RS14215 Stenotrophomonas maltophilia EPM1 30.9091 86.84 142.124
Polysaccharide Lyases (PLs) PL5 APU31024.1 Poly(Beta-D-mannuronate) lyase pmy:PMEN_RS08365 Pseudomonas mendocina ymp 86.7925 100.0 644.425
Polysaccharide Lyases (PLs) PL5 APW40088.1 Alginate lyase domain-containing protein tsa:ACIPR4_RS03945 Terriglobus saanensis SP1PR4 36.9146 93.07 207.994
Polysaccharide Lyases (PLs) PL5 AQZ96722.1 Alginate lyase domain-containing protein pmy:PMEN_RS08365 Pseudomonas mendocina ymp 52.4217 98.04 356.681
Polysaccharide Lyases (PLs) PL5 BBH51065.1 Alginate lyase tsa:ACIPR4_RS03945 Terriglobus saanensis SP1PR4 35.4331 88.39 220.32
Polysaccharide Lyases (PLs) PL5 ATN32335.1 Alginate lyase domain-containing protein tsa:ACIPR4_RS03945 Terriglobus saanensis SP1PR4 23.9234 57.57 65.855
Polysaccharide Lyases (PLs) PL5 AUF95880.1 Poly(Beta-D-mannuronate) lyase psv:PVLB_RS15575 Pseudomonas sp. VLB120 85.0282 92.42 615.535
Polysaccharide Lyases (PLs) PL5 AVD89554.1 Poly(Beta-D-mannuronate) lyase psv:PVLB_RS15575 Pseudomonas sp. VLB120 98.8827 96.49 719.153
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024