Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1788751 - 1788775 of 1794267 in total
CAZy Enzyme Classes CAZy Family ▲ GenBank Protein Name Gene ID MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Polysaccharide Lyases (PLs) PL7 AKV09682.1 Alginate lyase gm05026:B723_RS26080 Pseudomonas fluorescens NCIMB 11764 99.1071 100.0 455.677
Polysaccharide Lyases (PLs) PL7 AMJ78979.1 Uncharacterized protein amad:I636_RS11730 Alteromonas mediterranea UM4b 100.0 100.0 152.525
Polysaccharide Lyases (PLs) PL7 AMJ78979.1 Uncharacterized protein amaa:AMAD1_RS12190 Alteromonas mediterranea DE1 100.0 100.0 152.525
Polysaccharide Lyases (PLs) PL7 AMJ78979.1 Uncharacterized protein gm05969:AV942_RS12090 Alteromonas mediterranea 100.0 100.0 152.525
Polysaccharide Lyases (PLs) PL7 AMJ78979.1 Uncharacterized protein gm06376:AV941_12115 Alteromonas mediterranea 100.0 100.0 152.525
Polysaccharide Lyases (PLs) PL7 AMJ78979.1 Uncharacterized protein amai:I635_RS12110 Alteromonas mediterranea UM7 100.0 100.0 152.525
Polysaccharide Lyases (PLs) PL7 ANH75290.1 Alginate lyase family protein bur:BCEP18194_RS34740 Burkholderia lata 78.4553 91.11 385.185
Polysaccharide Lyases (PLs) PL7 AGZ35467.1 psv:PVLB_RS13490 Pseudomonas sp. VLB120 100.0 100.0 441.425
Polysaccharide Lyases (PLs) PL7 AFU99262.1 saga:M5M_RS10300 Simiduia agarivorans SA1 = DSM 21679 100.0 91.55 865.144
Polysaccharide Lyases (PLs) PL7 ANP76354.1 gm06316:AT730_RS16930 Vibrio alginolyticus 65.8929 96.55 766.148
Polysaccharide Lyases (PLs) PL7 ANO34549.1 gm06316:AT730_RS16930 Vibrio alginolyticus 60.3873 96.59 691.419
Polysaccharide Lyases (PLs) PL7 ANO34307.1 gm06316:AT730_RS16930 Vibrio alginolyticus 43.5484 86.71 206.838
Polysaccharide Lyases (PLs) PL7 ALR94021.1 gm06316:AT730_RS16930 Vibrio alginolyticus 98.9708 100.0 1187.56
Polysaccharide Lyases (PLs) PL7 ANO35280.1 gm06316:AT730_RS16930 Vibrio alginolyticus 36.0 85.22 174.096
Polysaccharide Lyases (PLs) PL7 ANP78354.1 gm06316:AT730_RS16930 Vibrio alginolyticus 43.3735 87.36 221.861
Polysaccharide Lyases (PLs) PL7 ANO34522.1 gm06316:AT730_RS16930 Vibrio alginolyticus 43.3333 95.23 226.098
Polysaccharide Lyases (PLs) PL7 ANI59731.1 gm05026:B723_RS26080 Pseudomonas fluorescens NCIMB 11764 91.4798 99.55 426.787
Polysaccharide Lyases (PLs) PL7 AFW03077.1 goh:B932_RS16565 Gluconobacter oxydans H24 100.0 100.0 472.626
Polysaccharide Lyases (PLs) PL7 APU30190.1 Alginate lyase 2 domain-containing protein pmy:PMEN_RS13025 Pseudomonas mendocina ymp 91.6216 100.0 682.174
Polysaccharide Lyases (PLs) PL7 AUP78677.1 Polysaccharide lyase family 7 protein gfo:GFO_RS05425 Christiangramia forsetii KT0803 71.9231 88.43 395.201
Polysaccharide Lyases (PLs) PL7 AUW57637.1 Alginate lyase 2 domain-containing protein gm05040:SYN6308_RS23345 Geminocystis herdmanii PCC 6308 43.026 65.47 303.523
Polysaccharide Lyases (PLs) PL7 AZL68811.1 Polysaccharide lyase family 7 protein psv:PVLB_RS13490 Pseudomonas sp. VLB120 81.6143 99.55 370.933
Polysaccharide Lyases (PLs) PL7 AZV46836.1 Polysaccharide lyase family 7 protein nam:NAMH_RS05775 Nautilia profundicola AmH 56.71 98.29 266.929
Polysaccharide Lyases (PLs) PL7 AVD90236.1 Polysaccharide lyase family 7 protein psv:PVLB_RS13490 Pseudomonas sp. VLB120 99.1071 100.0 437.187
Polysaccharide Lyases (PLs) PL7 BAX81597.1 Alginate lyase gfo:GFO_RS05425 Christiangramia forsetii KT0803 69.5818 94.26 385.956
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024